GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 06:37:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lagenorhynchus albirostris genome assembly, chromosome: 1.
OX459072.1:87831924-87831943
ACCAAGCTACCCCGCATGAGGGGCGTTTCC87831924CCCTTCCTACCCACACTTCACTTTGGACGCTGTACCTCCAGAGCAAGGTC
Phocoena phocoena genome assembly, chromosome: 2.
OZ004758.1:87472688-87472707
ACCAAGCTACCCTGCATAAGGGGCGTTTCC87472688CCCTTCCTACCCACACTTCACTTTGGGCGCTGCATCTCCAGAGCAAGGTC
CLPX1196.b1_G11.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPX1196, mRNA sequence.
DW076196.1:773-792
ATGCAAACACTGATGCAACAAAACAATCAC773CCCTTCCTACCCACACTTCAAATGCCATGAAGATTTTGGGTGAAGATGAG
CLPX1301.b1_J13.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPX1301, mRNA sequence.
DW077304.1:775-794
ATGCAAACACTGATGCAACAAAACAATCAC775CCCTTCCTACCCACACTTCAAATGCCATGAAGATTTTGGGTGAAGATGAG
Solanum melongena mRNA, clone: SmFL12P14, 5'end.
FS074898.1:73-92
CTTAAAAGGTAATGACAAATTCAAGTCCTC73CCCTTCCTACCCACACTTCATCCCCAAGCCATCCTCCTCCTCCTCCTCAT
Agriphila straminella genome assembly, chromosome: 9.
OX467312.1:4018559-4018578
CTTTAGAATGCTGTAGAAGACGTTCCCGTT4018559CCCTTCCTACCCACACTTCAACTCCACTGCACTCACACATAGAACTCTAT
Orcinus orca genome assembly, chromosome: 2.
OW443361.1:113793766-113793785
GACCTTGCTCTGGAGATACAGCGTCCAAAG113793766TGAAGTGTGGGTAGGAAGGGGGAAACGCCCCTCATGCGAGGTAGCTTGGT
Hyperoodon ampullatus genome assembly, chromosome: 3.
OX457058.1:92571105-92571124
GACCTTGCTCTGGAGATGCAGCGCCCAAAG92571105TGAAGTGTGGGTAGGAAGGGGGAAACGCCCCTTATGCGGGGTAGCTTGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCCTTCCTACCCACACTTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCCTTCCTACCCACACTTCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.357 | 0.348 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCCTACCCACACTTCA&k=0&no_gap=0&offset=0&limit=50
0.386 | 0.030 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGTGTGGGTAGGAAGGG&k=0&no_gap=0&offset=0&limit=44
0.388 | 0.001 | cgi_end;

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