GGGenome | Results

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2025-04-16 17:36:13, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Nannobrachium achirus genome assembly, chromosome: 13.
OY997650.1:33396435-33396455

GAGTTTGTCTGTCAATCCCCGCCCTCCTCA33396435GGTGGAGACTGAAAAGAAGGGGGCGGGACTAAGCATGGAGAGAACTGTGAA

Arachis hypogaea DNA, clone: AHGS42L23.
DH961586.1:557-577

AGAAAGAGGGGAGAAGACAATGGTAGTAGT557GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Arachis hypogaea DNA, clone: KICT07I10.
DH966673.1:174-194

AGAAAGAGGGGAGAAGACAATGGTAGTAGT174GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:9177053-9177073

AGAAAGAGGGGAGAAGACAATGGTAGTAGT9177053GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:9822823-9822843

AGAAAGAGGGGAGAAGACAATGGTAGTAGT9822823GGTGGAGACTGAAAAGAAGGGTAGTTTAGGAATTTCATTTAATTTTTTAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.105 | 0.096 | search_plus_done; http://172.18.8.135:50400/match?q=CCCTTCTTTTCAGTCTCCACC&k=0&no_gap=0&offset=0&limit=50
0.169 | 0.063 | search_minus_done; http://172.18.8.135:50400/match?q=GGTGGAGACTGAAAAGAAGGG&k=0&no_gap=0&offset=0&limit=50
0.172 | 0.004 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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