GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 09:38:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2004159646-A/3: Descrimination of genotype by DNA marker located in the vicinity of pungency locus of plant Capsicum, primers used to detect DNA marker and descrimination of genotype using the same
DD018811.1:1-23
1CCGTACCGCCCCATTGCGATTCC
JP 2004159646-A/1: Descrimination of genotype by DNA marker located in the vicinity of pungency locus of plant Capsicum, primers used to detect DNA marker and descrimination of genotype using the same
DD018809.1:747-769
TGCCCAAGAGTGCCCAAGAGTTTGTTTGTA747GGAATCGCAATGGGGCGGTACGGGTGCGCTGCT
Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:158379812-158379834
TGCCCAAGAGTTAAAGATTGCTTGTTTGTA158379812GGAATCGCAATGGGGCGGTACGGGTGCGGTGCGAGTTTTAAGCTATGCGGTGT
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:159099148-159099170
TGCCCAAGAGTTAAAGATTGCTTGTTTGTA159099148GGAATCGCAATGGGGCGGTACGGGTGCGGTGCGAGTTTTAAGCTATGCGGTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCGTACCGCCCCATTGCGATTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCGTACCGCCCCATTGCGATTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CCGTACCGCCCCATTGCGATTCC&k=0&no_gap=0&offset=0&limit=50
0.116 | 0.021 | search_minus_done; http://172.18.8.135:50400/match?q=GGAATCGCAATGGGGCGGTACGG&k=0&no_gap=0&offset=0&limit=49
0.118 | 0.002 | cgi_end;

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