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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-16 16:28:08, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Barbus barbus genome assembly, chromosome: 17.
OW387184.1:24309879-24309898
TAATCATATACTTCGTATACTTTCATCAAC24309879CCGTTGACTTTCCACTTCTTTTAATTGTGCACACATATTGATGTCTTTGA
Rutilus rutilus genome assembly, chromosome: 14.
OX637946.1:19318810-19318829
TAATCATATACTTCATATACTTTCATCAGC19318810CCGTTGACTTTCCACTTCTTTTAATCGATGTCTTTGAAGCAAGTCTAAAA
TSA: Centris flavifrons Contig39843.Cefl mRNA sequence.
JI023102.1:91-110
GTTATTATAATTAGCGTTGTCGTACTCTTT91CCGTTGACTTTCCACTTCTTGTTGAATGATGTCTAACAACGTAGAACTTT
Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14.
BX511227.7:11067-11086
TCAAAGCCATCAATATGTGTGCACAATTAA11067AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio strain T5D chromosome 6.
CP068740.1:46900779-46900798
TCAAAGCCATCAATATGTGTGCACAATTAA46900779AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio strain T5D chromosome 14.
CP068748.1:31064959-31064978
TCAAAGCCATCAAAATGTGTGCACAATTAA31064959AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio strain Tubingen chromosome 14.
CP137027.1:35921440-35921459
TCAAAGCCATCAATATGTGTGCACAATTAA35921440AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Cyprinus carpio genome assembly, scaffold: LG28, chromosome: 28.
LN590678.1:1824038-1824057
TCAAAGACATCAATATGTGTGCACAATTAA1824038AAGAAGTGGAAAGTCAACGGGCTGATGAAAGTATACGAAGTATATGATTA
Cyprinus carpio genome assembly, scaffold: LG28, chromosome: 28.
LN590678.1:11507677-11507696
TCAAAGACATCAATATGTGTGCACAATTAA11507677AAGAAGTGGAAAGTCAACGGGCTGATGAAAGTATACGAAGTATATGATTA
Danio rerio genome assembly, chromosome: 14.
LR812051.1:31904836-31904855
TCAAAGCCATCAATATGTGTGCACAATTAA31904836AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio genome assembly, chromosome: 14.
LR812076.1:31258537-31258556
TCAAAGCCATCAATATGTGTGCACAATTAA31258537AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio aesculapii genome assembly, chromosome: 14.
LR812497.1:33522569-33522588
TCAAAGCCATCAATATGTGTGCACAATTAA33522569AAGAAGTGGAAAGTCAACGGCTAATGAAAGTATATGAAGTATATGATTAT
Danio kyathit genome assembly, chromosome: 14.
LR812532.1:37663273-37663292
TCAAAGACATCAATATGTGTGCACAATTAA37663273AAGAAGTGGAAAGTCAACGGCTGATGAAAGTATATGAAGTATATGATTAT
Danio rerio strain Cooch Behar (CB) genome assembly, chromosome: 14.
LR812557.1:26677233-26677252
TCAAAGCCATCAATATGTGTGCACAATTAA26677233AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio strain Nadia (NA) genome assembly, chromosome: 14.
LR812582.1:29222464-29222483
TCAAAGCCATCAAAATGTGTGCACAATTAA29222464AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio genome assembly, chromosome: 14.
LR812607.1:28671314-28671333
TCAAAGCCATCAATATGTGTGCACAATTAA28671314AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Danio rerio genome assembly, chromosome: 14.
OX063303.1:35467116-35467135
TCAAAGCCATCAATATGTGTGCACAATTAA35467116AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Phoxinus phoxinus genome assembly, chromosome: 12.
OX424420.1:18839929-18839948
TTTTAGACTTGCTTCAAAGAGATCAATTAA18839929AAGAAGTGGAAAGTCAACGGGCTGATGAAAGTATACGGAGTATATGATTA
Squalius cephalus genome assembly, chromosome: 14.
OX439260.1:19687992-19688011
TTTTAGACTTGCTTCAAAGACATCGATTAA19687992AAGAAGTGGAAAGTCAACGGGCTGATGAAAGTATATGAAGTATATGATTA
TSA: Cannabis sativa PK04856.1_1.CasaPuKu mRNA sequence.
JP449386.1:646-665
GGAAAAGACCGAGGACAGTTAAGACAAGCG646AAGAAGTGGAAAGTCAACGGATGACTCATATTGCTGTTGAGAGAAATCGA
Zebrafish DNA sequence *** SEQUENCING IN PROGRESS *** from clone CH73-228C5.
LO018019.2:2818-2837
TCAAAGCCATCAATATGTGTGCACAATTAA2818AAGAAGTGGAAAGTCAACGGCTGATCAAAGTATATGCAGTATATGATTAT
Haliclona (Haliclona) sp. KJP-2009 elongation factor 1 alpha (EF1a) mRNA, partial cds.
GQ330974.1:1095-1114
GTTTGCCGAACTAAAGGAAAAGATCGACAG1095AAGAAGTGGAAAGTCAACGGAAGACAACCCCAAGAGTGTGAAGAGTGGTG

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Maximum 100000 results can be retrieved in various formats shown below:

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