GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 00:02:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Rutilus rutilus genome assembly, chromosome: 2.
OX637934.1:39222196-39222215
CGTAAGCGAGAAAAGGACAGAGAAAGTGTA39222196CCTAAATGCGAGTTTGCGTGCGTCGCTTGATATATTTGTGATTTGTTTAG
Lotus japonicus B-129 DNA, chromosome 6, complete sequence.
AP022634.1:14759384-14759403
GATAAGAATTTTGTAAAATTACGTGGTGTG14759384CCTAAATGCGAGTTTGCGTGGAGGAACAACGGTAAAACCGTAAAACCCTT
Lotus japonicus genomic DNA, chromosome 6, clone: LjB02K20, BM1429.
AP009945.1:13077-13096
AAGGGTTTTACGGTTTTACCGTTGTTCCTC13077CACGCAAACTCGCATTTAGGCACACCACGTAATTTTACAAAATTCTTATC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTAAATGCGAGTTTGCGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTAAATGCGAGTTTGCGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.114 | 0.105 | search_plus_done; http://172.18.8.135:50400/match?q=CCTAAATGCGAGTTTGCGTG&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=CACGCAAACTCGCATTTAGG&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.001 | cgi_end;

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