GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 20:53:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, clone: LjT12L18, TM0457.
AP007366.2:26832-26859
ATATATGTTGATTTATATACATATAAATAA26832CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAACAGCATACAATTCCCG
Lotus japonicus genomic DNA, chromosome 1, clone: LjT41G02, TM1306.
AP007977.2:6618-6645
TATATATATATATATATATATATAAGCAAT6618CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus genomic DNA, chromosome 6, clone: LjT13O03, TM1499.
AP008114.2:81049-81076
TATATGTTGATATACATATATATAAGCAAT81049CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT13P17, TM1901.
AP009881.1:79538-79565
TATATATATATATATATATATATAAATAAT79538CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus genomic DNA, clone: LjT10I07, TM2108.
AP009935.1:42622-42649
TATATATATATATATATATATATAAGTAAT42622CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus genomic DNA, chromosome 6, clone: LjT18B08, TM0084.
AP009949.1:5787-5814
TATATATATATATATCTATATATAAATAAT5787CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAGTAGCATACAATTCCAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT07F03, TM0847.
AP010109.1:41382-41409
TATATATATATATATATATATATAAACAAT41382CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus genomic DNA, chromosome 5, clone: LjT09C21, TM1077.
AP010154.1:16668-16695
TATATATGTTGAAATATATATATAAATAAT16668CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAACACACAATTCCAG
Lotus japonicus genomic DNA, chromosome 3, clone: LjT47I17, TM0642.
AP010592.1:22856-22883
TATATATGTTGATATATATATATAAACAAT22856CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACGATTCCAG
Lotus japonicus genomic DNA, chromosome 3, clone: LjT11G09, TM0022.
AP009648.1:14800-14827
TATATATGTTGATATATATATATAAGCAAT14800CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT09A11, TM1981.
AP009783.1:67195-67222
TATATGTTGTTATATATACATATAGATAAT67195CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCATACAATTCCAG
Lotus japonicus genomic DNA, chromosome 4, clone: LjT41L19, TM2084.
AP010354.1:94524-94551
TATATATATATATATATATATATAAGTAAT94524CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAACATACAATTCCAG
Lotus japonicus genomic DNA, clone: LjB24C14, BM2655.
AP012060.1:3879-3906
TATATATATATATATATATATATAAGCAAT3879CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:8248487-8248514
TATATATATATATATATATATATAAGCAAT8248487CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:18875960-18875987
TATATATATATATATATATATATAAATAAT18875960CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:20766077-20766104
TATATATGTTGATATATATATATAAGTAAT20766077CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGGACACGATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:26031607-26031634
TATATATATATATATATATATATAAATAAT26031607CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:38187331-38187358
TATGTTGATATATATATATGTATAAATAAT38187331CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:38212894-38212921
TATATGTTGATATATATATGTATAAATAAT38212894CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:39717980-39718007
TATATATATATATATATATATATAAACAAT39717980CCTAGCATGTTATTGGCTCTAACAATGCTTCAAATAAATCAAACAGCACACAATTCCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:39724819-39724846
TATATATATATATATATATATATAAACAAT39724819CCTAGCATGTTATTGGCTCTAACAATGCTTCAAATAAATCAAACAGCACACAATTCCA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:40237799-40237826
TATATGTTGATATATATATATATAAACAAT40237799CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:40596571-40596598
TATATGTTATTATATATATATAATTATATT40596571CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAACAGCATACAATGCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:41364118-41364145
TATGTTGATATATATATATATATAAATAAT41364118CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:41388539-41388566
TATATATATATATATATATATATAAATAAT41388539CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:43180636-43180663
TATATGTCGTTATATATATATATTAATAAT43180636CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:43730748-43730775
TAGATATATATGTTGATATATATAAGTAAT43730748CCTAGCATGTTATTGGCTCTAACAATGCTTCACTAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:43739247-43739274
ATAGATATATATGTTGAGTGTATAAGTAAT43739247CCTAGCATGTTATTGGCTCTAACAATGCTTCACTAATTCAAATAGCATATAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:45181664-45181691
TATGTTGATATATATATATATATAAGCAAT45181664CCTAGCATGTTATTGGCTCTAACAATGCTCCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:47409675-47409702
GATATATATGTTGATATATATATAAACAAT47409675CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACGATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:51446644-51446671
TATATGTTGAGATATATATATATAAACAAT51446644CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACGATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:51857497-51857524
TATATATGTTGATATATATATATAAGCAAT51857497CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:52629130-52629157
TATATATGTGTATGTATATATATTAATAAT52629130CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAACAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:53120507-53120534
GATATATATGTTGATATATATATAAGCAAT53120507CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:53148712-53148739
TATATGTTGATATATATATATATAAGAAAT53148712CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:53698644-53698671
TATATGTTTATATATATATATATAAATAAT53698644CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:55891823-55891850
TTGTTATATATATATATACATATCGATAAT55891823CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACGATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:56769333-56769360
TAGATATATATGTTGATATATATAAACAAT56769333CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACGATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:70276928-70276955
TATATGTTGTTATATAGACATATAGATAAT70276928CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:78927098-78927125
TATATATATATATATATATATATAAGCAAT78927098CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:111187002-111187029
GATATATATGTTGATATATATATCAATAAT111187002CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCCCACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:111201695-111201722
TTGATATATATATATATATATATAAATAAT111201695CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:3787437-3787464
TTGATATATATATATATATATATAAATAAT3787437CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:3795920-3795947
TATATATGTTGATATATATATATAAATAAT3795920CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:5634760-5634787
TAGATATATGTTGATATATATATAAGCAAT5634760CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:5643060-5643087
TAGATATATGTTGATATATATATAAGCAAT5643060CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:10079578-10079605
GATATATATGTTGATATATATATAAACAAT10079578CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:10086789-10086816
TATATATGTTGATATATATATATAAACAAT10086789CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:10341670-10341697
TATATATATATATATATATATATAAACAAT10341670CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAACCAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:10350090-10350117
TATATATATATATATATATATATAAACAAT10350090CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAACCAGCACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:15129109-15129136
ATATATATATATATATATATATATAAATAA15129109CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAACAACATACAATTCCCG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:15870033-15870060
TATATGTTTATATATATATATATAAATAAT15870033CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:18161055-18161082
TATATGTTGTTATATATACATATAGATAAT18161055CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:18957584-18957611
TATATATATATATATATATATATAAACAAT18957584CCTAGCATGTTATTGGCTCTAACAATGCTTCAAATAAATCAAACAGCACACAATTCCA
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:20603430-20603457
TAGATATATATGTTTATATATATTAATAAT20603430CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAATTCAAATAGCATACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:20706587-20706614
AATATATGTTGATATATATATATAAGCAAT20706587CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAACACACGTTTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:21973329-21973356
TATGTTGATATATATATATATATAAGCAAT21973329CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAACACACAATTCCAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:22291181-22291208
TATATATATATATATATATATATAAGCAAT22291181CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCTAG
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:24454069-24454096
TATAGATATATATGTTGTTATATAAGCAAT24454069CCTAGCATGTTATTGGCTCTAACAATGCTTCAATAAATCAAACAGCACACAATTCCAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTAGCATGTTATTGGCTCTAACAATGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTAGCATGTTATTGGCTCTAACAATGC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.110 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=CCTAGCATGTTATTGGCTCTAACAATGC&k=0&no_gap=0&offset=0&limit=50
0.165 | 0.055 | search_minus_done; http://172.18.8.135:50400/match?q=GCATTGTTAGAGCCAATAACATGCTAGG&k=0&no_gap=0&offset=0&limit=0
0.165 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).