GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-26 08:23:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Vigna angularis mRNA, clone: VES10H08.
HX946031.1:3-29
TA3CCTCATTCTTACATCCTTAAACACTTGTTTTTTCTGTTACGTACGTTCTTCCTTCTT
Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
AP015042.1:27381076-27381102
AAGAAGGAAGAACGTACGTAACAGAAAAAA27381076CAAGTGTTTAAGGATGTAAGAATGAGGTAGAAGGTGGTGTTTGAGTTGCGTTAGAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTCATTCTTACATCCTTAAACACTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTCATTCTTACATCCTTAAACACTTG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.173 | 0.165 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCATTCTTACATCCTTAAACACTTG&k=0&no_gap=0&offset=0&limit=50
0.189 | 0.015 | search_minus_done; http://172.18.8.135:50400/match?q=CAAGTGTTTAAGGATGTAAGAATGAGG&k=0&no_gap=0&offset=0&limit=49
0.190 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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