GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Muscardinus avellanarius genome assembly, chromosome: X.
OY726563.1:65530440-65530459

CACCCCCCTCCTCCTCCTCCTCCTCTTCCT65530440CCTCTTCTTCACCCTCTTCATCCTCCTCTTCCTCCTCCTGTTCCCCCTCC

Muscardinus avellanarius genome assembly, chromosome: X.
OY726563.1:65530527-65530546

CCTCCTCCTCCTCCTCCTCTTCCTCTTCCT65530527CCTCTTCTTCACCCTCTTCATCCTTCTCTTCCTCCTCCTGTTCCCCCTCC

Muscardinus avellanarius genome assembly, chromosome: X.
OY726563.1:65530641-65530660

CCTCTTCCTCCTCCTCCTCTTCCTCTTCCT65530641CCTCTTCTTCACCCTCTTCATCCTTCTCTTCCTCCTCCTGTTCCCCCTCC

Pipistrellus pipistrellus genome assembly, chromosome: 2.
LR862357.1:606947-606966

TCAGTAAGTGCAGATAGCAAAACCCTACTA606947CCTCTTCTTCACCCTCTTCAAACGGCCAATCTTCCCAGGTCTCTCTACTT

Pipistrellus nathusii genome assembly, chromosome: 2.
OY882859.1:196678043-196678062

TCAGTAAGTGCAGATAGCAAAACCCTACTA196678043CCTCTTCTTCACCCTCTTCAAACGGCCTAACTTCCCAGGTCTCTCTACTT

Pipistrellus nathusii genome assembly, chromosome: 2.
OY883179.1:196800891-196800910

TCAGTAAGTGCAGATAGCAAAACCCTACTA196800891CCTCTTCTTCACCCTCTTCAAACGGCCTAACTTCCCAGGTCTCTCTACTT

Vespertilio murinus genome assembly, chromosome: 3.
OZ004706.1:201223733-201223752

TAAGTGAGTGCAGATAGCAATACTCTACTA201223733CCTCTTCTTCACCCTCTTCAGATGGCCAATCTCCCCGGTCTCTCTGGCAT

Epinephelus fuscoguttatus DNA, LG10, complete sequence.
AP022684.1:19767027-19767046

CTGGCTGCCAGTGGCCAAGAGCACCCTCAT19767027CCTCTTCTTCACCCTCTTCATGGCCACAAGCAAAGTAAGATCATGGCTGC

Parambassis ranga genome assembly, chromosome: 17.
LR131967.1:22167154-22167173

GACTTGTTCCCCTCTTGCTCTCTTCATCCC22167154CCTCTTCTTCACCCTCTTCATCCCCCTCTTCATCCCCCTCTTCTTCACCC

Parambassis ranga genome assembly, chromosome: 17.
LR131967.1:22167190-22167209

CTTCACCCTCTTCATCCCCCTCTTCATCCC22167190CCTCTTCTTCACCCTCTTCATCTTCTTCATTCACCCTCTTCATCCCCCTC

Parambassis ranga genome assembly, chromosome: 17.
LR131967.1:22167260-22167279

CATCCCCCTCTTCATCCCCCTCTTCATCCC22167260CCTCTTCTTCACCCTCTTCATCTTCTTCATCCAGCCTTGTTTGGTTTTGT

Rutilus rutilus genome assembly, chromosome: 4.
OX637936.1:25995616-25995635

GGCAGGGAGGCTGTGAGGGTTCAGGTTGTA25995616CCTCTTCTTCACCCTCTTCAGCCATCTCCTGCTCTCTCGGGCTAGGTGCC

Fringilla coelebs genome assembly, chromosome: 6.
OY740730.1:54517151-54517170

GGGGCTCTCCGACAGGCGGGAGCTGCAGCT54517151CCTCTTCTTCACCCTCTTCATCCTGGCCTACGCCATGGTCCTGCTGGGCA

Fringilla coelebs genome assembly, chromosome: 6.
OY740730.1:54521388-54521407

GGGGCTCTCCGACAGGCGGGAGCTGCAGCT54521388CCTCTTCTTCACCCTCTTCATCCTGGCCTACGCCATGGTCCTGCTGGGCA

Limanda limanda genome assembly, chromosome: 14.
OY755005.1:12948695-12948714

AAAAAACCTTCGTCTCTCTGCACCGTCTCT12948695CCTCTTCTTCACCCTCTTCACACTGCGACCACCCGGCTCTACACGTTGTG

Mobula hypostoma genome assembly, chromosome: 3.
OY992594.1:172478632-172478651

TACACCCAGTCCAGGCAACATCCTAGTGAA172478632CCTCTTCTTCACCCTCTTCAAAGTCTCCACACCCTTTCTGTAACGCAGTG

Mobula hypostoma genome assembly, chromosome: 4.
OY992595.1:8646125-8646144

ACCTGGCTGGAAACCTGAGAAGAGTTTATT8646125CCTCTTCTTCACCCTCTTCAGAGCCTCAACATACTTCCTGGGGCAACCAG

Xenopus tropicalis EST, clone TEgg007d13 5'.
AL848797.2:148-167

GAGCATGTTCATCTTGTTCATACTCTTCCT148CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus tropicalis EST, clone TGas122p11 3'.
AL970754.2:178-197

GAGCATGTTCATCTTGTTCATACTCTTCCT178CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus tropicalis EST, clone TNeu085o07 3'.
BX694066.1:178-197

GAGCATGTTCATCTTGTTCATACTCTTCCT178CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus tropicalis EST, clone TEgg039j18 3'.
BX771143.1:179-198

GAGCATGTTCATCTTGTTCATACTCTTCCT179CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus tropicalis EST, clone TTbA047n19 3'.
CR417407.1:181-200

GAGCATGTTCATCTTGTTCATACTCTTCCT181CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

JGI_XZG62957.rev NIH_XGC_tropGas7 Xenopus tropicalis cDNA clone IMAGE:7576822 3', mRNA sequence.
CX422439.1:171-190

GAGCATGTTCATCTTGTTCATACTCTTCCT171CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

JGI_XZG43319.rev NIH_XGC_tropGas7 Xenopus tropicalis cDNA clone IMAGE:7558088 3', mRNA sequence.
CX497051.2:171-190

GAGCATGTTCATCTTGTTCATACTCTTCCT171CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

JGI_CAAO6820.rev NIH_XGC_tropTe5 Xenopus tropicalis cDNA clone IMAGE:7703476 3', mRNA sequence.
CX939863.2:169-188

GAGCATGTTCATCTTGTTCATACTCTTCCT169CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus (Silurana) tropicalis NBRP cDNA clone: rst14i22, 3' end.
DC136891.1:117-136

GAGCATGTTCATCTTGTTCATACTCTTCCT117CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus (Silurana) tropicalis NBRP cDNA clone: rst28i24, 3' end.
DC141088.1:102-121

GAGCATGTTCATCTTGTTCATACTCTTCCT102CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus (Silurana) tropicalis NBRP cDNA clone: rst85k05, 3' end.
DC157738.1:103-122

GAGCATGTTCATCTTGTTCATACTCTTCCT103CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

Xenopus (Silurana) tropicalis NBRP cDNA clone: rst112n11, 3' end.
DC165291.1:117-136

GAGCATGTTCATCTTGTTCATACTCTTCCT117CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

CBST3151.rev NICHD_XGC_tropThy1 Xenopus tropicalis cDNA clone IMAGE:8924541 3', mRNA sequence.
EL669606.1:154-173

GAGCATGTTCATCTTGTTCATACTCTTCCT154CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

CBWN11976.g1 NICHD_XGC_tropTe1 Xenopus tropicalis cDNA clone IMAGE:8917291 3', mRNA sequence.
EL830278.1:169-188

GAGCATGTTCATCTTGTTCATACTCTTCCT169CCTCTTCTTCACCCTCTTCAGCTTCCTCCCCCTCATCTTCCTCCTCATCC

TSA: Porites australiensis mRNA, contig: Pau-assembly_1827.
FX437058.1:666-685

CCAAGTCCTCGGGGACGTCTTCCTCTTCCT666CCTCTTCTTCACCCTCTTCATTTTTCAAGTAGGTGTTGGGGTTGGTGGCA

TSA: Bdellocephala annandalei mRNA, contig: contig_36066.
FX840308.1:597-616

GCATCTTGGCAATCATTTCTTCATTCATTT597CCTCTTCTTCACCCTCTTCAATAGTAGCCAGACCTTGCGCTGATCTAAGA

TSA: Pisum sativum Ps_contig_mira-ass_24114 mRNA sequence.
JI920430.1:630-649

TTAGCAGAAGAAAAGAATCAAAGAACCAAC630CCTCTTCTTCACCCTCTTCACCCTCACCAAACTCCAGTATCTCTACATCA

TSA: Pisum sativum Ps_contig_mira-ass_28867 mRNA sequence.
JI925041.1:112-131

AGCAGAAGAAAAGAAATCAAGAGAACCAAC112CCTCTTCTTCACCCTCTTCACCCTCAAACTTTCAACAACCGAACCTCACC

TSA: Pisum sativum Ps_contig_mira-ass_102302 mRNA sequence.
JI971597.1:184-203

AGCAGAAAGAAAAGAATCAAAAGAACCAAC184CCTCTTCTTCACCCTCTTCACCCTCAAACTTTCAACAACCGAACCTCACC

TSA: Cunninghamia lanceolata Unigene69494_C.lanceolata mRNA sequence.
JV037521.1:178-197

TAAAACCGTCTTTCTCATACTCATCCTGCC178CCTCTTCTTCACCCTCTTCACCGGCTTCCTCAGCTGCCTCTATATCCAAG

Capsicum annuum Takanotsume DNA, chromosome 2, sequence.
AP026697.1:97781616-97781635

AATCAAGAAAAATATCTTGTTCCATTATGG97781616CCTCTTCTTCACCCTCTTCATCTTCATCATGCAGAAACCCTACCAAAAAC

Arachis hypogaea cultivar Shitouqi chromosome B06.
CP030998.1:134497351-134497370

CACAAACCGACACTCACATACACTCACACT134497351CCTCTTCTTCACCCTCTTCACATTCATCTGAGTCTATGACATGTAAGGTT

Arachis ipaensis cultivar K30076 chromosome 06.
CP049897.1:133436122-133436141

CACAAACCGACACTCACATACACTCACACT133436122CCTCTTCTTCACCCTCTTCACATTCATCTGAGTCTATGACATGTAAGGTT

Curvularia clavata strain yc1106 chromosome 1.
CP089274.1:2505960-2505979

GAAAACGAAACTACAAGATATTCGCTCGCA2505960CCTCTTCTTCACCCTCTTCATCACGAACCGGGTACCTCGATGCCGCCCAT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 3.
CP124729.1:151487804-151487823

CCTCTTCTATGGTTTTCTAAAAAATTTATC151487804CCTCTTCTTCACCCTCTTCACCATCTCATCATATGAGTCTTTGAGGCTCT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 2.
CP124730.1:98463771-98463790

AATCAAGAAAAATATCTTGTTCCATTATGG98463771CCTCTTCTTCACCCTCTTCATCTTCATCATGCAGAAACCCTACCAAAAAC

Cryptococcus sp. DSM 104548 isolate OR849 chromosome 7.
CP144036.1:906274-906293

TCTCATCTTCCCCATCGTCGGCAGCGGTCT906274CCTCTTCTTCACCCTCTTCACCCTCCACCTTCTTGCTCCCTTTAAATTCT

Vicia faba genome assembly, chromosome: 1S.
OX451735.1:486682238-486682257

CTGGAGGATACTATTCCTCGGAGTAGTCTT486682238CCTCTTCTTCACCCTCTTCAAATTCTGACAGAACCGCTGTTTCTTTTCCT

Potentilla sterilis genome assembly, chromosome: 8.
OY821761.1:19872956-19872975

CCTCATCCTCATCTTCGTCCTCATCTTCAT19872956CCTCTTCTTCACCCTCTTCACCGTTAACCTCATCATGCTCAACATCAGCA

Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:352832498-352832517

TTAAAATTGATATTGTTATACCATTTGATT352832498CCTCTTCTTCACCCTCTTCATGGTAGTCATAATCATCAACAATTTTAGAA

Pantoea vagans strain PV989 plasmid pPV989-167, complete sequence.
CP028351.1:122502-122521

GAACCTGACCTTTAACGTCCGGCACCAGGT122502CCTCTTCTTCACCCTCTTCACTGTCAGATGTTTTGTCAAAACGTCCGAGC

Paenibacillus pabuli strain E1 chromosome, complete genome.
CP073714.1:6130344-6130363

GTTGGCGCGCCATGTCCTCTTCACTGATAT6130344CCTCTTCTTCACCCTCTTCACGAATCACTGGTGAATCTTCCCCGTAATGA

Psychroserpens ponticola strain MSW6 chromosome, complete genome.
CP116221.1:3288769-3288788

CAATAATAACAGTTTCATAGATTTCTTCTT3288769CCTCTTCTTCACCCTCTTCACCTTCATCCATTTCTAATCTATTGATTAAC

Amblyteles armatorius genome assembly, chromosome: 1.
OW121686.1:9812954-9812973

GTCGTACGATGCGGGACCGGTCGTCTTCCT9812954CCTCTTCTTCACCCTCTTCAGGCTCTGAAATACGACGGCCAAGCTGTCCT

Meconema thalassinum genome assembly, chromosome: 12.
OX336400.1:112321148-112321167

GAATGAACAAGTAAACAGGTTCTAGGTCCT112321148CCTCTTCTTCACCCTCTTCACCCAACGCGCCTTCCCCACCTCCAAGATGG

Spisula solida genome assembly, chromosome: 10.
OX365953.1:44528796-44528815

CCATAGCTTCACCCTCTTCGCTTTTCTCAC44528796CCTCTTCTTCACCCTCTTCATCACTTTCCACAACTCTCGCTTTCTTTTTC

Eulithis testata genome assembly, chromosome: 12.
OX382205.1:5604807-5604826

TCCCGATAAGGAAGTGGTTGGGCGTGAGGC5604807CCTCTTCTTCACCCTCTTCAGTCCTGATGAGTGGTCTTGAGTTCACCACA

Merzomyia westermanni genome assembly, chromosome: 3.
OX465290.1:14055235-14055254

TTCAACCGGTAACCCTGTCTAATTTCCTAC14055235CCTCTTCTTCACCCTCTTCATTTTTCTCTATCACCTCTTCTACCGCTTCC

Ceriagrion tenellum genome assembly, chromosome: 8.
OY720640.1:101039855-101039874

AGATCATCTTCCGCTCTTTCTAAGTATTTT101039855CCTCTTCTTCACCCTCTTCAACATGCCATCTCTCGTCACATCCTCAATCC

Amblyjoppa fuscipennis genome assembly, chromosome: 4.
OY754491.1:583186-583205

ACAGACTCGTTCTCCGGGCAAACCTCCGCG583186CCTCTTCTTCACCCTCTTCAACGCGGCCATTCGCGACCCGCGTAATTTCC

Polydrusus tereticollis genome assembly, chromosome: 5.
OY755259.1:18177947-18177966

GAGGGCTTTGAGACGCCTCCGCCTCTCGTC18177947CCTCTTCTTCACCCTCTTCAGTTGAAGGTTGTTTCTCTCCTTCAGAACTA

Polydrusus tereticollis genome assembly, chromosome: 5.
OY987330.1:18233344-18233363

GAGGGCTTTGAGACGCCTCCGCCTCTCGTC18233344CCTCTTCTTCACCCTCTTCAGTTGAAGGTTGTTTCTCTCCTTCAGAACTA

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Debug Info:

0.009 | 0.009 | search_start;
0.645 | 0.636 | search_plus_done; http://172.18.8.135:50400/match?q=CCTCTTCTTCACCCTCTTCA&k=0&no_gap=0&offset=0&limit=50
0.718 | 0.074 | search_minus_done; http://172.18.8.135:50400/match?q=TGAAGAGGGTGAAGAAGAGG&k=0&no_gap=0&offset=0&limit=0
0.718 | 0.000 | cgi_end;

Summary:

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