GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 08:23:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:8048832-8048851
CGAGAATTTGATACGTTTAAAGAGATCAAT8048832CCTGTCAACCCTGCATTTCCCATAGAAAAGTGTGACAATTAAAAGATAAT
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:7850678-7850697
CGAGAATTTGATACGTTTAAAGAGATCAAT7850678CCTGTCAACCCTGCATTTCCCATAGAAAAGTGTGACAATTAAAAGATAAT
Pyrus communis genome assembly, chromosome: 11.
OY757078.1:5989561-5989580
CGAGAATTTGATACGTTTAAAGAGATCAAT5989561CCTGTCAACCCTGCATTTCCCATACAAAAATGTGACAATTAAACGATAAT
TSA: Pyrus communis mRNA, contig: lc34061.
FX641958.1:157-176
ATTGTCCTTTAATTGTCACATTTTTGTATG157GGAAATGCAGGGTTGACAGGATTGATCTCTTTAAACGTATCAAATTCTCG
Pan troglodytes clone CH251-514B7, WORKING DRAFT SEQUENCE.
AC280488.1:156664-156683
TTCCCTGCCCACCCAGGCAGCTGTCCCAAG156664GGAAATGCAGGGTTGACAGGGCTAGCCTGAAGGCACATCGCCCTCTCTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTGTCAACCCTGCATTTCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTGTCAACCCTGCATTTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CCTGTCAACCCTGCATTTCC&k=0&no_gap=0&offset=0&limit=50
0.110 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=GGAAATGCAGGGTTGACAGG&k=0&no_gap=0&offset=0&limit=47
0.111 | 0.001 | cgi_end;

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