GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 00:54:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RC0574f.ab1.
DE245666.1:172-191
AAATATATTACAAGGTTTTTATTATTTTTT172CCTTAACCATTGCCATTGTAATGAGAGATAAGAATTTCAATTTGTGTCTC
Schizosaccharomyces japonicus strain yFS275 chromosome 2.
CP133360.1:5634638-5634657
AGAACCGCGGAACCGTCTTGCCAACGGTGG5634638TACAATGGCAATGGTTAAGGGAACACGAGCAACAATGAGTGCCTTATGAA
Schizosaccharomyces japonicus genome assembly, chromosome: 2.
OY101112.1:4262279-4262298
AGAACCGCGGAACCGTCTTGCCAACGGTGG4262279TACAATGGCAATGGTTAAGGGAACACGAGCAACAATGAGTGCCTTATGAA
Harmothoe impar genome assembly, chromosome: 17.
OX381720.1:64425334-64425353
TCATATAAAACCCCGTATAACCCTAGCCCC64425334TACAATGGCAATGGTTAAGGGCTACGTTACGTCTACGTTTTATAAGCTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTAACCATTGCCATTGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTAACCATTGCCATTGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTAACCATTGCCATTGTA&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=TACAATGGCAATGGTTAAGG&k=0&no_gap=0&offset=0&limit=49
0.132 | 0.002 | cgi_end;

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