GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:12:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Heterocephalus glaber genome assembly, chromosome: 13.
OZ001078.1:51561854-51561873
TTAACTAAAGTTAAAAATATTTTCTGGTAA51561854CCTTCACATTCTCACAGTCATTAAATAATGATCCAAATTTTAATGACCTC
Heterocephalus glaber genome assembly, chromosome: 13.
OZ001121.1:49395175-49395194
TTAACTAAAGTTAAAAATATTTTCTGGTAA49395175CCTTCACATTCTCACAGTCATTAAATAATGATCCAAATTTTAATGACCTC
Alisma plantago-aquatica genome assembly, chromosome: 2.
OY856410.1:854002194-854002213
TTCTTCCACGCTACCGCCAAGCGCTCTCCT854002194CCTTCACATTCTCACAGTCATGCTCAAGGCCTGACGCTTGGTGGTCGTCT
Heterocephalus glaber genome assembly, chromosome: 13.
OX090921.1:356172-356191
GAGGTCATTAAAATTTGGATCATTATTTAA356172TGACTGTGAGAATGTGAAGGTTACCAGAAAATATTTTTAACTTTAGTTAA
Heterocephalus glaber genome assembly, chromosome: 13.
OX090953.1:32282936-32282955
GAGGTCATTAAAATTTGGATCATTATTTAA32282936TGACTGTGAGAATGTGAAGGTTACCAGAAAATATTTTTAACTTTAGTTAA
Coregonus sp. 'balchen' genome assembly, chromosome: 38.
LR778290.1:3820155-3820174
GGTAAGACTTGAAGAATTATCTTTCACGAT3820155TGACTGTGAGAATGTGAAGGGAGGGTGACCACAAATGTAGGATACTATTA
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:769792876-769792895
AGACGACCACCAAGCATCAGGCCTTGAGCA769792876TGACTGTGAGAATGTGAAGGAGGAGAGCACTTGGTGGCAGCGTGGAAGAA
Hipparchia semele genome assembly, chromosome: Z.
OW121737.1:5863984-5864003
GCGACATCTCTGTTATAAAGTGCCAAACCC5863984TGACTGTGAGAATGTGAAGGAGTCGTACAGCTTCGCTGTACTATGTGAAC
Odontocerum albicorne genome assembly, chromosome: 18.
OX463856.1:8626181-8626200
TGAGAATTATGAGTATTATAATATTGTATA8626181TGACTGTGAGAATGTGAAGGCAATAAAATGTGTGTACATGGAGATAAAAT
Alentia gelatinosa genome assembly, chromosome: 13.
OX465591.1:48652887-48652906
AGAGAGAACACGTAATTCTCACAGCTGAAA48652887TGACTGTGAGAATGTGAAGGTTGCCAGACTCCATGCTGGAGACGTAGGAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTCACATTCTCACAGTCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCACATTCTCACAGTCA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.093 | 0.085 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTCACATTCTCACAGTCA&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.022 | search_minus_done; http://172.18.8.135:50400/match?q=TGACTGTGAGAATGTGAAGG&k=0&no_gap=0&offset=0&limit=47
0.120 | 0.005 | cgi_end;

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