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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 19:51:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Onychomys arenicola genome assembly, chromosome: 3.
OX460349.1:52011382-52011399
CTTACACTTCGGATTGCGGATCACAATAGG52011382CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Onychomys leucogaster genome assembly, chromosome: 3.
OX460373.1:52671176-52671193
CTTACACTTCGGATTGCGGATCACAATAGG52671176CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Onychomys leucogaster genome assembly, chromosome: 3.
OX460420.1:52300978-52300995
CTTACACTTCGGATTGCGGATCACAATAGG52300978CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Onychomys arenicola genome assembly, chromosome: 3.
OX460444.1:50410998-50411015
CTTACACTTCGGATTGCGGATCACAATAGG50410998CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Peromyscus eremicus genome assembly, chromosome: 3.
OX460468.1:50404912-50404929
CTTACATTTCGGATTGGGGATTGCAATAGG50404912CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Onychomys torridus genome assembly, chromosome: 3.
OX460884.1:50933056-50933073
CTTACACTTCGGATTGCGGATCACAATAGG50933056CCTTCTCGATGTTCTCCATGTCCTGGAAGTCCTTCCAAGCATTAGCTA
Canis lupus familiaris breed Labrador retriever chromosome 17a.
CP050603.1:36947488-36947505
AAATGAGACATTCGTTGGGGTTGGTGGTGG36947488CCTTCTCGATGTTCTCCACCAGCTGCTGTAATTTCAGGGTCTCCGACC
Canis lupus familiaris breed Labrador retriever chromosome 17b.
CP050614.1:36960509-36960526
AAATGAGACATTCGTTGGGGTTGGTGGTGG36960509CCTTCTCGATGTTCTCCACCAGCTGCTGTAATTTCAGGGTCTCCGACC
Hyperoodon ampullatus genome assembly, chromosome: 18.
OX457073.1:34934417-34934434
TTGCAGATGAGAAATTGGACTCACAGAGTC34934417CCTTCTCGATGTTCTCCAGTGAGGCAATGAGGGAGGCTGGACTGGAAG
Cyprinus carpio genome assembly, scaffold: 000000341.
LN590806.1:732851-732868
AACCATTCAAGAGCAGAAGTGGCCGCAGTA732851CCTTCTCGATGTTCTCCAGTTTGAGATGTGCAGCCGCCTCATACTTTG
Cyprinus carpio genome assembly, scaffold: 000000341.
LN590806.1:843382-843399
AACCATTCAAGAGCAGAAGTGGCCGCAGTA843382CCTTCTCGATGTTCTCCAGTTTGAGATGTGCAGCCGCCTCATACTTTG
Rhinatrema bivittatum genome assembly, chromosome: 4.
LR584390.1:13323203-13323220
CTTTCCAGAACGGTGCAGATTACAGGACTC13323203CCTTCTCGATGTTCTCCAACCACTTCAAGACAGAGAGCCCGCATCTCT
Phoxinus phoxinus genome assembly, chromosome: 25.
OX424433.1:19144140-19144157
AGACATTCAAAAGCAGTTGTAGCCGCAGTA19144140CCTTCTCGATGTTCTCCAGTTTCAGATGTGCAGCGGCCTCGTCCTTCG
Rutilus rutilus genome assembly, chromosome: 23.
OX637955.1:16494870-16494887
AGACATTCAAAAGCAGTTGTAGCCGCAGTA16494870CCTTCTCGATGTTCTCCAGTTTCAAATGTGCAGCGGCCTCTTCGTTCG
Blennius ocellaris genome assembly, chromosome: 11.
OY730211.1:26369590-26369607
CGCTCGTGTCCCGAGCCGGGTCACAGTACG26369590CCTTCTCGATGTTCTCCATGTTGACCAGGTCCTTGTAGGTCACACCGT
Pseudomonas phage PG1, complete genome.
OQ504958.1:22155-22172
TCTCGTTGTGGCGGTTGACGTACCAGATGG22155CCTTCTCGATGTTCTCCAGCGGGTTGCCCTTGGCATCGCGGCGGAACA
JP 2020195344-A/303: Oil-rich Chlamydomonas sp. mutant strains.
OG161217.1:42965-42982
GCAGCTCGATCTTCTCCCCCCGCTCCAGCA42965CCTTCTCGATGTTCTCCACCATGACCCCCTTGACCTCGTTGACCTGAG
Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE02a012F15_SP6.
AM386735.1:332-349
GAAGCTCAATTTTCTCACCACGGTCAAGAA332CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
SCRUAD1062G03.b AD1 Saccharum hybrid cultivar SP70-1143 cDNA clone SCRUAD1062G03 3', mRNA sequence.
CA068522.1:383-400
CCTTGCACCTGGCGAGGAAAGCCGCCCTAG383CCTTCTCGATGTTCTCCACCTTGCCAGGCAAGGCCTTGAGGGTGCTCG
SCACAM1072E07.b AM1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCACAM1072E07 3', mRNA sequence.
CA071606.1:363-380
CCTTGCACCTGGCAAGGAAGGCCGCCCTAT363CCTTCTCGATGTTCTCCACCTTGCCAGCCAAGGCCTTGAGGGTGCTCG
SCQSAM1031E04.b AM1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCQSAM1031E04 3', mRNA sequence.
CA077449.1:384-401
CCTTGCACCTGGCAAGGAAGGCCGCCCTAA384CCTTCTCGATGTTCTCCACCTTGCCAGCCCAAGCCTTGAGGGTGCTCC
SCQGAM2110F01.b AM2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCQGAM2110F01 3', mRNA sequence.
CA087270.1:450-467
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG450CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJFRT1008E02.b RT1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCJFRT1008E02 3', mRNA sequence.
CA133580.1:281-298
CCTTGCACCTGGCAAGGAAGGCCGCCCTAG281CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJLRT1022F02.b RT1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCJLRT1022F02 3', mRNA sequence.
CA135946.1:400-417
CCTTGCACCTGGCAAGGAAGGCCGCCCTAG400CCTTCTCGATGTTCTCCACCTTGCCAACCCAGGCCTTTAAGGTGCTCG
SCQSRT2035H03.b RT2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCQSRT2035H03 3', mRNA sequence.
CA143504.1:398-415
CCTTGCACCTGGCGAGGAAGGCCGCCCTTA398CCTTCTCGATGTTCTCCACCTTGCCAGCCCAAGCCTTGAAGGTTGCTC
SCQSRT2035H08.b RT2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCQSRT2035H08 3', mRNA sequence.
CA143508.1:400-417
CCTTGCACCTGGCAAGGAAGGCCGCCCTAA400CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJFST1016B04.b ST1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCJFST1016B04 3', mRNA sequence.
CA175098.1:380-397
CCTTGCACCTGGCAAGGAAGGCCGCCCTAG380CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCSGST3120G04.b ST3 Saccharum hybrid cultivar SP80-3280 cDNA clone SCSGST3120G04 3', mRNA sequence.
CA186666.1:383-400
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG383CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCAGFL1094B12.g FL1 Saccharum hybrid cultivar (mixed) cDNA clone SCAGFL1094B12 5', mRNA sequence.
CA204161.1:399-416
CCTTGCACCTGGCAAGGAAGGCCGCCCTAG399CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGAGGTGCTC
SCRUAD1134D04.g AD1 Saccharum hybrid cultivar SP70-1143 cDNA clone SCRUAD1134D04 5', mRNA sequence.
CA217782.1:389-406
CCTTGCACCTGGCAAGGAAGGCCGCCCTAG389CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJFAD1C10C07.b AD1 Saccharum hybrid cultivar SP70-1143 cDNA clone SCJFAD1C10C07 3', mRNA sequence.
CA218734.1:383-400
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG383CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJLFL3015F06.b Saccharum officinarum FL3 Saccharum hybrid cultivar (mixed) cDNA clone SCJLFL3015F06 3', mRNA sequence.
CA228032.1:399-416
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG399CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJLFL3015F07.b Saccharum officinarum FL3 Saccharum hybrid cultivar (mixed) cDNA clone SCJLFL3015F07 3', mRNA sequence.
CA228033.1:399-416
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG399CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCJLSB1060G05.b SB1 Saccharum hybrid cultivar SP80-3280 cDNA clone SCJLSB1060G05 3', mRNA sequence.
CA234629.1:399-416
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG399CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCRURT3063C09.b RT3 Saccharum hybrid cultivar SP80-3280 cDNA clone SCRURT3063C09 3', mRNA sequence.
CA268849.1:466-483
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG466CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCRULB2065A04.b LB2 Saccharum hybrid cultivar SP80-3280 cDNA clone SCRULB2065A04 3', mRNA sequence.
CA271155.1:383-400
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG383CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCSFSD1064F06.b SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCSFSD1064F06 3', mRNA sequence.
CA284284.1:246-263
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG246CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
SCSFSD1066H04.b SD1 Saccharum hybrid cultivar (mixed) cDNA clone SCSFSD1066H04 3', mRNA sequence.
CA284635.1:412-429
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG412CCTTCTCGATGTTCTCCACCTTGCCAGCCCAAGCCTTGAGGGTGCTCG
HS1_49_D03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_49_D03_A012 3', mRNA sequence.
CD210727.1:97-114
ACGCAAGCAGTCGCTGCTTCCCCATCTCAC97CCTTCTCGATGTTCTCCATCAGTTTGCCCTGTTTGTGCATGGCAAAAG
EST770231 BEA Rhipicephalus microplus cDNA clone BEABE56, mRNA sequence.
CK180911.1:247-264
CGCAGGGCGGCCTCTGACTGTTGCAGGTGA247CCTTCTCGATGTTCTCCAGCTGCTTCTCGGACTTCTCGACGTTCTCCT
EST771103 BEA Rhipicephalus microplus cDNA clone BEABJ59, mRNA sequence.
CK181783.1:330-347
ACGAGGGCTGCTTGTGGCTGGTGCAGGTGA330CCTTCTCGATGTTCTCCAGCTGCTTCTCGGACTTCTCGACCTTCTCCT
EST776570 BEA Rhipicephalus microplus cDNA clone BEACF40, mRNA sequence.
CK187255.1:208-225
CGCAGGGCGGCCTCTGACTGTTGCAGGTGA208CCTTCTCGATGTTCTCCAGCTGCTTCTCGGACTTCTCGACGTTCTCCT
EST897662 BEA Rhipicephalus microplus cDNA clone BEAET68, mRNA sequence.
CV443749.1:330-347
ACGAGGGCTGCTTGTGGCTGGTGCAGGTGA330CCTTCTCGATGTTCTCCAGCTGCTTCTCGGACTTCTCGACCTTCTCCT
Meso01595 Mesostigma vegetative library Mesostigma viride cDNA clone Meso2b20h11.r1, mRNA sequence.
DN262611.1:106-123
GCAGCTCGATCTTCTCGCCCCGGTCCAGCA106CCTTCTCGATGTTCTCCATCATGATGTTCTTCACGTCGGTGACCTGCT
JGI_CAAV11476.rev CAAV Pimephales promelas testis 7-8 month adults, males and females pooled (H) Pimephales promelas cDNA clone CAAV11476 3', mRNA sequence.
DT284313.1:260-277
TAACATTACGGATCAATCCCACATCGTATG260CCTTCTCGATGTTCTCCATTTTCAGATGTGCAGCGGCCTCTTCCTTCG
ZO__Ef0003B17.f ZO__Ef Zingiber officinale cDNA clone ZO__Ef0003B17 5', mRNA sequence.
DY370497.1:360-377
GTAGCTCAATTTTCTCTCCACGATCAAGCA360CCTTCTCGATGTTCTCCATCATGACTCCTTTTACTTCAGAAACTTGAG
BNZB_UP_157_F11_29SEP2005_085 Brassica napus BNZB Brassica napus cDNA 5', mRNA sequence.
EE568051.1:440-457
GAAGCTCAATCTTCTCACCACGGTCAAGAA440CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCCGCG
OL1625F Brassica oleracea var. alboglabra leaf cDNA library Brassica oleracea var. alboglabra cDNA clone OL1625, mRNA sequence.
EH414991.1:346-363
GAAGCTCAATTTTCTCACCACGGTCAAGAA346CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGCG
65JKBNMO_UP_057_G07_18JUL2006_051 65JKBNM0 Brassica napus cDNA 5', mRNA sequence.
EL591473.1:352-369
GAAGCTCAATCTTCTCACCACGGTCAAGAA352CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
0197678 Brassica napus Stem library Brassica napus cDNA, mRNA sequence.
EV128207.1:362-379
GAAGCTCAATCTTCTCACCACGGTCAAGAA362CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
0092032 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV194546.1:330-347
GAAGCTCAATTTTCTCACCACGGTCAAGAA330CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGCG
0092841 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV195355.1:312-329
GAAGCTCAATTTTCTCACCACGGTCAAGAA312CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
0133526 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV218418.1:360-377
GAAGCTCAATCTTCTCACCACGGTCAAGAA360CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
RR1BC77JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EV532638.1:440-457
GAAGCTCAATTTTCTCACCACGGTCAAGAA440CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGCG
RR3AB74JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EV544241.1:443-460
GAAGCTCAATCTTCTCACCTCGGTCAAGAA443CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACTTGAG
RS2B075JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW729280.1:213-230
GAAGCTCAATTTTCTCACCACGGTCAAGAA213CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
RS2B277JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EW729434.1:362-379
GAAGCTCAATTTTCTCACCACGGTCAAGAA362CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
BR019473 callus cDNA library KBCG Brassica rapa subsp. pekinensis cDNA clone KBCG-162C02 5', mRNA sequence.
EX034829.1:316-333
GAAGCTCAATTTTCTCACCACGGTCAAGAA316CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGAG
BR021803 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-020C03 5', mRNA sequence.
EX037159.1:336-353
GAAGCTCAATTTTCTCACCACGGTCAAGAA336CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGAG
RR1CE10JQ RR1(CS) Raphanus raphanistrum subsp. maritimus cDNA 3', mRNA sequence.
EX752514.1:417-434
GAAGTTCAATCTTCTCACCACGGTCAAGAA417CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGCG
RR3BU01JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EX766835.1:91-108
AAAGCTCAATCTTCTCACCTCGGTCAAGAA91CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACTTGAG
CBAC1044.g1:P T. versicolor host exudate forward SSH library Triphysaria versicolor cDNA, mRNA sequence.
EX982203.1:238-255
GAAGCTCTATCTTTTCTCCACGATCTAAAA238CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCTGAAA
RR2DO92JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EY902926.1:393-410
GAAGCTCAATCTTCTCACCACGGTCAAGAA393CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACTTGCG
RR2ED85JQ RR2(MS) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EY904588.1:424-441
GAAGCTCAATCTTCTCACCACGGTCAAGAA424CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
RR3DZ89JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EY911682.1:376-393
GAAGCTCAATTTTCTCACCACGGTCAAGAA376CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
RR3EB32JQ RR3(NY) Raphanus raphanistrum subsp. raphanistrum cDNA 3', mRNA sequence.
EY912473.1:395-412
GAAGCTCAATCTTCTCACCACGGTCAAGAA395CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGCG
RS2DB17JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
EY933958.1:496-513
GAAGCTCAATTTTCTCACCACGGTCAAGAA496CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGAG
TSA: Dianthus caryophyllus mRNA, contig: CAK09.23778.C1.
FX328173.1:160-177
GGAGTTCAATCTTCTCACCGCGATCTAGAA160CCTTCTCGATGTTCTCCATCATAAC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_1518.
FX663360.1:474-491
GAAGCTCAATTTTCTCACCACGGTCAAGAA474CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGAG
TSA: Raphanus sativus var. sativus RNA, contig: WG3_6708.
FX664358.1:433-450
GAAGCTCAATTTTCTCACCACGGTCAAGAA433CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_21417.
FX708247.1:302-319
GAAGCTCAATTTTCTCACCACGGTCAAGAA302CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10156.
FX753398.1:461-478
GAAGCTCAATTTTCTCACCACGGTCAAGAA461CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGAG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_10328.
FX760738.1:20-37
TTCTCACCACGGTCAAGAA20CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_33895.
FX763355.1:20-37
TTCTCACCACGGTCAAGAA20CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
TSA: Brassica rapa x Raphanus sativus RNA, contig: BB3_55392.
FX771945.1:385-402
GAAGCTCAATCTTCTCACCACGGTCAAGAA385CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
TSA: Dianthus superbus Ds_CL3296Contig1 mRNA sequence.
JL391626.1:393-410
GGAGTTCAATCTTCTCACCGCGATCTAGAA393CCTTCTCGATGTTCTCCATCATAACTCCTTTGACCTCGGAAATCTGGG
TSA: Raphanus sativus RS25408 mRNA sequence.
JT809955.1:383-400
GAAGCTCAATTTTCTCACCACGGTCAAGAA383CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
TSA: Costus pictus Locus_20685_Transcript_1/1.Copileaf mRNA sequence.
JW229196.1:584-601
GCAACTCAATTTTCTCTCCACGTTCAAGAA584CCTTCTCGATGTTCTCCATCATAACTCCTTTGACTTCAGAAACCTGAG
TSA: Curcuma longa Locus_14918_Transcript_3/3_Confidence_0.714_Length_882_B mRNA sequence.
JW763075.1:392-409
GTAGCTCAATTTTCTCTCCGCGATCAAGCA392CCTTCTCGATGTTCTCCATCATGACTCCTTTTACTTCAGAAACTTGAG
TSA: Curcuma longa Locus_21134_Transcript_2/8_Confidence_0.526_Length_1000_C mRNA sequence.
JW785630.1:319-336
GCAGTTCAATTTTCTCACCGCGATCCAGCA319CCTTCTCGATGTTCTCCATCATGACTCCTTTTACTTCAGAAACTTGAG
TSA: Curcuma longa Locus_21134_Transcript_7/8_Confidence_0.421_Length_997_C mRNA sequence.
JW785631.1:442-459
GTAGCTCAATTTTCTCTCCGCGATCAAGCA442CCTTCTCGATGTTCTCCATCATGACTCCTTTTACTTCAGAAACTTGAG
Arabidopsis thaliana genome survey sequence T7 end of BAC T2H17 of TAMU library from strain Columbia of Arabidopsis thaliana.
AL088698.1:375-392
TTTGCGTCTGGCAGCTGTCGCTTGTGCGCA375CCTTCTCGATGTTCTCCACCATCACGTCTTTGACCTCGTTCACCTGTA
BOMDT53TF BO_2_3_KB Brassica oleracea genomic clone BOMDT53, genomic survey sequence.
BH720446.1:638-655
ATTGGAAACGCAAAAAGGTTCAGATTCAAA638CCTTCTCGATGTTCTCCATCATAACACCCCTTAACTTCAGAGACTTGC
llb02h09.b1 B.oleracea002 Brassica oleracea genomic, genomic survey sequence.
BZ064241.1:605-622
ATTGGAAACGCAAAAAGGTTCAGATTCAAA605CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGCG
104_264_10502514_114_30358 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone 10502514, genomic survey sequence.
CW034381.1:399-416
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG399CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGTGTGCTCG
fsbb001f232k05k0 Sorghum methylation filtered library (LibID: 104) Sorghum bicolor genomic clone fsbb001f232k05, genomic survey sequence.
CW475993.1:535-552
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG535CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGTGTGCTCG
iy40e10.g1 Sub-library of four pooled sorghum BAC clones: 162g12 (sbb15540), 99b05 (sbb9425), 77C15, and 103O10 Sorghum bicolor genomic, genomic survey sequence.
ED505051.1:509-526
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG509CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGTGTGCTCG
Vigna unguiculata subsp. unguiculata cultivar IT97K-499-35 clone BAC H010H03, *** SEQUENCING IN PROGRESS ***, 34 unordered pieces.
AC273893.1:62327-62344
TACCTCCTTCATTTCCACTACACTTCTACT62327CCTTCTCGATGTTCTCCATGGATCTTCTTCTTTTCATCCACCAAGGAG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrB002B23, complete sequence.
AC232437.1:129811-129828
TTTGGAAACGCAAAAGGGTTCAGATTCAAA129811CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGAGACTTGAG
Vigna unguiculata cultivar Xiabao 2 chromosome Vu01.
CP039350.1:16911053-16911070
TACCTCCTTCATTTCCACTACACTTCTACT16911053CCTTCTCGATGTTCTCCATGGATCTTCTTCTTTTCATCCACCAAGGAG
Cenchrus purpureus cultivar elephant grass chromosome A5.
CP053458.1:3855632-3855649
CACCATCGCCGAGCGACGTCTCCCCAACAA3855632CCTTCTCGATGTTCTCCATCTGTCTTCTGAGGATTCGAGCGTGCCCTC
Tricholoma bakamatsutake strain SF-Tf05 chromosome 8.
CP114864.1:9229461-9229478
TTTATGCCCACGACACCCCAACACCCACTT9229461CCTTCTCGATGTTCTCCACGACAACAAGCGATGCGGCATCCTTTGACC
Brassica napus cultivar Xiang5A chromosome 7.
CP123882.1:401465-401482
AAAAAAAAAAGAAAGAGTTCAGATTCTAAA401465CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
Phytophthora plurivora strain TJ71 chromosome 16.
CP125271.1:630359-630376
GCAGCTCAAACTTCTCTCCTCTGTCCAGGA630359CCTTCTCGATGTTCTCCACCATAATGTCCTTGACGTCGTCGATCTGCT
Camelina sativa cultivar CO46 chromosome 16.
CP131546.1:3190602-3190619
AGATTGTCATGGATACACAAATTAATCAGA3190602CCTTCTCGATGTTCTCCATCATAACACCCTTCACCTCTGTAACTTGAG
Sorghum bicolor cultivar Hongyingzi chromosome 3.
CP137827.1:76856628-76856645
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG76856628CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGTGTGCTCG
Sorghum bicolor cultivar Huandiaonuo chromosome 3.
CP137837.1:77233876-77233893
CCTTGCACCTGGCGAGGAAGGCCGCCCTAG77233876CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGTGTGCTCG
Brassica napus genome assembly, chromosome: C08.
HG994372.1:1117717-1117734
ATCAACACAAAGAAAGAGTTCAGACTAAAA1117717CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
Brassica oleracea HDEM genome, scaffold: C8.
LR031879.1:1231995-1232012
ATCAACACAAAGAAAGAGTTCAGACTAAAA1231995CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACCTGCG
Raphanus sativus genome assembly, chromosome: 7.
LR778316.1:29299804-29299821
GCAAAAAACAAAGGGTAGGTCAGATTCGAA29299804CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGAG
Euphrasia confusa genome assembly, chromosome: 11.
OX940959.1:5894459-5894476
ACATTGAACTACACGCTAGTGGTATTTATA5894459CCTTCTCGATGTTCTCCATCATAACCCCCTTAACTTCCGAAACCTGCG
Phragmites australis genome assembly, chromosome: 1.
OY282612.1:52475464-52475481
CCTTGCACCTGGTGAGGAAGGCCGCCCTTG52475464CCTTCTCGATGTTCTCCACCTTGCCAGCCCAGGCCTTGAGGGTGCTCG
Hordeum bulbosum genome assembly, chromosome: 4H_1.
OY737614.1:251212260-251212277
CAGTCTGAAGGGTGTCTTATGGCCATAGCT251212260CCTTCTCGATGTTCTCCAACGCAGCTCTTAGTCTGCCGATGTATCCTT
Hordeum bulbosum genome assembly, chromosome: 4H_3.
OY737657.1:237404192-237404209
CAGTCTGAAGGGTGTCTTATGGCCATAGCT237404192CCTTCTCGATGTTCTCCAACGCAGCTCTTAGTCTGCCGATGTATCCTT
Raphanus sativus genome assembly, chromosome: 8.
OY743205.1:435879-435896
AAAAAAAGAAAGAAAGAGTTCAGATTCAAA435879CCTTCTCGATGTTCTCCATCATAACACCCTTAACTTCAGACACCTGCG
Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:1287355-1287372
GCAAAAAACAAAGGGTAGGTCAGATTCGAA1287355CCTTCTCGATGTTCTCCATCATAACACCCTTAACCTCAGACACTTGAG
Narthecium ossifragum genome assembly, chromosome: 13.
OY986975.1:22474481-22474498
TTCTGATAGTACAGGATACGAGAGTTCAAA22474481CCTTCTCGATGTTCTCCATAGATCTCTTTTTGACAGAGGGAATTAAGA
Streptomyces sp. SN-593 DNA, nearly complete genome.
AP018365.1:3494664-3494681
TCGGCCCGTGCCGCTCGAAGAAGGCGTGCG3494664CCTTCTCGATGTTCTCCATCTTGAACAGCCGGGACTCCGGCCGGGAGA
Truepera radiovictrix DSM 17093, complete genome.
CP002049.1:3236386-3236403
CCCCCACAAACGCCCCCAACCGCTCCAAAG3236386CCTTCTCGATGTTCTCCATGCTGGTGGCGTACGAAAACCGCGCCTGAC
Serratia plymuthica AS9, complete genome.
CP002773.1:2100701-2100718
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2100701CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Serratia sp. AS12, complete genome.
CP002774.1:2100689-2100706
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2100689CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Serratia sp. AS13, complete genome.
CP002775.1:2100687-2100704
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2100687CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Serratia plymuthica 4Rx13, complete genome.
CP006250.1:1991824-1991841
CAGGCACCAGCTCAGCCAGTTTCTCCGCGG1991824CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Pseudoxanthomonas suwonensis strain J1, complete genome.
CP011144.1:2700266-2700283
CCTTGTCCTGCGCGGCCAGCGAGCCGCTGA2700266CCTTCTCGATGTTCTCCAGGGTCCGGGCGATGTGCGCCACGTTCTGGT
Arthrobacter sp. LS16, complete genome.
CP012171.1:2368715-2368732
CGTCCAGCGCCTCGACCAGCTCGCCCTTGG2368715CCTTCTCGATGTTCTCCACGCCGCCGAATTCGCCGGCGTGCGCGGTGC
Alloyangia pacifica strain YSBP01 plasmid unnamed1, complete sequence.
CP022191.1:297838-297855
AGTCGCCGACGAGGTCGTCGACGCTCTCGA297838CCTTCTCGATGTTCTCCATGAAGTAGTCGATGGCGCGCTTGTGCTCCG
Pseudomonas chlororaphis subsp. piscium strain ZJU60 chromosome, complete genome.
CP027656.1:742670-742687
TGAGGCCGATGCCGGCGTCTTCGGCGGCGG742670CCTTCTCGATGTTCTCCAGGCCCATCATGGCGGCGAAGTCATCGGTGT
Glutamicibacter nicotianae strain OTC-16 chromosome, complete genome.
CP033081.1:2252001-2252018
CGTCCAGCGCCTCTACCAGCTCGCCCTTGG2252001CCTTCTCGATGTTCTCCACCCCGCCGAATTCGCCGGCGTGCGCGGTGC
Glutamicibacter creatinolyticus strain LGCM 259 chromosome, complete genome.
CP034412.1:2086907-2086924
CGGGCAGCGCCTCAACGAGTTCGCCCTTGG2086907CCTTCTCGATGTTCTCCACCCCGCCGAACTCGCCGGCGTGGGCGCTGC
Comamonas testosteroni strain T5-67 chromosome, complete genome.
CP043568.1:3425179-3425196
CGGCTCTTGTGATGCCGTACTGGGCCCGGG3425179CCTTCTCGATGTTCTCCAGCGCGACGCGCAGATCGCGATTGTTGCTCA
Glutamicibacter sp. ZJUTW chromosome, complete genome.
CP043624.1:2215679-2215696
CGTCCAGCGCCTCTACCAGCTCGCCCTTGG2215679CCTTCTCGATGTTCTCCACCCCGCCGAATTCGCCGGCGTGCGCGGTGC
Nocardioides sp. HDW12B chromosome, complete genome.
CP049867.1:1489704-1489721
AGGTGTCGAAGCCGCGCGGCGTCGCCCCCT1489704CCTTCTCGATGTTCTCCAGCGAGGTGGAGCCGGTCACCGAGCAGACCT
Glutamicibacter nicotianae strain ZM05 chromosome, complete genome.
CP059853.1:2276444-2276461
CGTCCAGCGCCTCTACCAGCTCGCCCTTGG2276444CCTTCTCGATGTTCTCCACCCCGCCGAATTCGCCGGCGTGCGCGGTGC
Serratia plymuthica strain UBCF_13 chromosome, complete genome.
CP068771.1:1818786-1818803
CCGGCACCAGTTCCGCCAGCTTCTCTGCGG1818786CCTTCTCGATGTTCTCCACGTCGTTGTACAGGTAGTAAACCTGGCCGC
Glutamicibacter protophormiae strain R912 chromosome, complete genome.
CP069806.1:2331254-2331271
CGTCCAGCGCCTCGACCAGTTCGCCCTTGG2331254CCTTCTCGATGTTCTCCACGCCGCCGAACTCGCCGGCATGCGCGGTGC
Variovorax sp. PDNC026 chromosome, complete genome.
CP070343.1:3246067-3246084
CATGCAGGCTGCGCAGGCCAGCACCGGCGG3246067CCTTCTCGATGTTCTCCACGGCAAAGCCACGTCCGTCGTCTCGCACGC
Serratia symbiotica strain 24.1 chromosome, complete genome.
CP072652.1:1244504-1244521
CTGGCACCAGTTCCGCTAGCTTTTGCGCGG1244504CCTTCTCGATGTTCTCCACATCGTTGTACAGATAATAAACCTGCCCGC
Aureimonas altamirensis strain C2P003 chromosome, complete genome.
CP089311.1:1257323-1257340
CCTTGCTGCATGCGCGCAACGAGGGCATCG1257323CCTTCTCGATGTTCTCCAGCCTCAGCGGCTGGACGCTGGCCGCCGCAT
Comamonas testosteroni strain X13 chromosome, complete genome.
CP090445.1:3230325-3230342
CGGCTCTTGTGATGCCGTACTGGGCCCGGG3230325CCTTCTCGATGTTCTCCAGCGCGACGCGCAGATCGCGATTGTTGCTCA
Serratia plymuthica strain SASK2000 chromosome, complete genome.
CP100764.1:2100706-2100723
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2100706CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Comamonas sp. C11 chromosome, complete genome.
CP101743.1:3270438-3270455
CGGCTCTTGTGATGCCGTACTGGGCCCGGG3270438CCTTCTCGATGTTCTCCAGCGCGACGCGCAGATCGCGATTGTTGCTCA
Streptomyces sp. NBC_00448 chromosome, complete genome.
CP107913.1:4151721-4151738
TCGGCCCGTGCCGCTCGAAGAAGGCGTGCG4151721CCTTCTCGATGTTCTCCATCTTGAACAGCCGGGACTCCGGCCGGGAGA
Streptomyces sp. NBC_00223 chromosome, complete genome.
CP108109.1:3235371-3235388
TGGGCCCGTGGTGTTCGAAGAATGCGTGCG3235371CCTTCTCGATGTTCTCCATCTTGAAGAGCCGGGAATCGGGCCGCCGGA
Kitasatospora purpeofusca strain NBC_00222 chromosome, complete genome.
CP108110.1:3571856-3571873
TGAGGAAGCGCCAGAGCGGGCGGTCCTTGG3571856CCTTCTCGATGTTCTCCAGCATCAGCCCGGTGTTCTTCTTCGGCGCAC
Kitasatospora purpeofusca strain NBC 01555 chromosome, complete genome.
CP109369.1:3194472-3194489
TGAGGAAGCGCCAGAGCGGGCGGTCCTTGG3194472CCTTCTCGATGTTCTCCAGCATCAGCCCGGTGTTCTTCTTCGGCGCAC
Crossiella sp. CA-258035 chromosome, complete genome.
CP116413.1:8842345-8842362
GCAGCACCGGCTCCGCCGGGCCGGCCACAC8842345CCTTCTCGATGTTCTCCAGCAGGTGCTTGCCGATCATGAGGTCGTCCG
Glutamicibacter nicotianae strain AT6 chromosome, complete genome.
CP127168.1:2253518-2253535
CGTCCAGCGCCTCTACCAGCTCGCCCTTGG2253518CCTTCTCGATGTTCTCCACCCCGCCGAATTCGCCGGCGTGCGCGGTGC
Glutamicibacter protophormiae strain NG8 chromosome, complete genome.
CP139422.1:2366957-2366974
CGTCCAGCGCCTCGACCAGTTCGCCCTTGG2366957CCTTCTCGATGTTCTCCACGCCGCCGAACTCGCCGGCATGCGCGGTGC
Glutamicibacter protophormiae strain NG4 chromosome, complete genome.
CP139423.1:2366960-2366977
CGTCCAGCGCCTCGACCAGTTCGCCCTTGG2366960CCTTCTCGATGTTCTCCACGCCGCCGAACTCGCCGGCATGCGCGGTGC
Serratia symbiotica SCt-VLC genomic scaffold 09.
FR904238.2:1494-1511
CTGGCACCAGTTCCGCTAGCTTTTGCCCGG1494CCTTCTCGATGTTCTCCACATCGTTGTACAGATAATAAACCTGCCCGC
Serratia plymuthica strain NCTC8900 genome assembly, chromosome: 1.
LR134151.1:2107994-2108011
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2107994CCTTCTCGATGTTCTCCACGTCGTTGTACAGGTAGTAAACCTGGCCGC
Serratia plymuthica strain NCTC8015 genome assembly, chromosome: 1.
LR134478.1:2119199-2119216
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2119199CCTTCTCGATGTTCTCCACGTCGTTGTACAGGTAGTAAACCTGGCCGC
Serratia plymuthica strain NCTC12961 genome assembly, chromosome: 1.
LS483469.1:2133239-2133256
CCGGCACCAGCTCAGCCAGTTTCTCCGCGG2133239CCTTCTCGATGTTCTCCACGTCGTTGTACAGATAGTAAACCTGGCCGC
Streptomyces sp. TLI_053 genome assembly, chromosome: I.
LT629775.1:3770155-3770172
TGAGGAAGCGCCAGAGCGGGCGGTCCTTGG3770155CCTTCTCGATGTTCTCCAGCATCAGCCCGGTGTTCTTCTTCGGCGCAC
Smittia sp. YW1114-2 chromosome 1.
CP093832.1:19208181-19208198
AGCTGCTGTCGTCGCCTGACAAGAATCTTT19208181CCTTCTCGATGTTCTCCAGCACGTTTCTCTTGCTCGCAGACTTCTTGA
Capitulum mitella isolate CP1-10 chromosome 13.
CP099851.1:19159100-19159117
TCTGGACGCCCAGCTCCTGCAGCGTGATGT19159100CCTTCTCGATGTTCTCCAGCAGCCGCGACATGAAGCGCCCGTCGTCCC
Notodromas monacha.
OA885304.1:8541-8558
CGGGCAAGCAGGAAGAAAGCGTGGTCATTG8541CCTTCTCGATGTTCTCCAAGACCACTTGCGCCTTGTCCACTTCCTTGC
Ichneumon xanthorius genome assembly, chromosome: 1.
OU824200.1:6431231-6431248
TAAAAATCTTGCTGGCCAACGCTTCGTCTA6431231CCTTCTCGATGTTCTCCACGGGGTCTTTGACGATGGTTGCCTTGTTCT
Ischnura elegans genome assembly, chromosome: 3.
OV121102.1:72367774-72367791
TGGATTTTTGGAGAATGGTGGGATGGCGAA72367774CCTTCTCGATGTTCTCCAAGCTTTCGCCATCGCGCCACTGTTTGAAGC
Gibbula magus genome assembly, chromosome: 3.
OW388291.1:8739217-8739234
TCTCACCAGGTTTGATTCCTTCATCGATGG8739217CCTTCTCGATGTTCTCCATCTGACTCTTGCTTAGTCCGACCATCATCA
Acholoe squamosa genome assembly, chromosome: 13.
OX439047.1:15593709-15593726
CAAAAGGTGAACTGCCTTTTACCCCCCTCC15593709CCTTCTCGATGTTCTCCACCACCCATTGAAGTAATACCGTAAGTAAAG
Myopa testacea genome assembly, chromosome: 1.
OX451345.1:40853057-40853074
GATCCTTCTTAGCTGAGCTGCTGCTCTCCT40853057CCTTCTCGATGTTCTCCATCATTTCATCCTCTTCACTCACTGCAGCTT
Timandra comae genome assembly, chromosome: 14.
OY292367.1:144198-144215
TGTCCATCTCCTCCTTCGTCAGCCGGATCG144198CCTTCTCGATGTTCTCCACTTGCTGGTAGAAGTCGCCCGACAGGTCGA
Amblyjoppa fuscipennis genome assembly, chromosome: 7.
OY754494.1:15905477-15905494
TGTAAATCTTGCTGGCCAATGCTTCGTCTA15905477CCTTCTCGATGTTCTCCACTGGGTCCTTGACGATGCTGGCCTTGTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTCTCGATGTTCTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCTCGATGTTCTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
2.335 | 2.327 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTCTCGATGTTCTCCA&k=0&no_gap=0&offset=0&limit=50
2.453 | 0.117 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAGAACATCGAGAAGG&k=0&no_gap=0&offset=0&limit=0
2.453 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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