GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-16 03:47:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium repens mRNA, clone: WCC32k03_045, unspecified EST.
FY465442.1:432-451
ATACGATTCTCAATCGCCTCCACCTTCCGC432CCTTGAAATCACTGCCGATTATAACGTCGCCGATCACCGCCGCCCTTTCC
Medicago arabica genome assembly, chromosome: 7.
OX326970.1:9632963-9632982
ACTTCAGGATTTCGATTCCTCGTCTTCCGC9632963CCTTGAAATCACTGCCGATTATCCCGCCGCCGATCAACGTCCTTTCCAAA
Streptosporangium sp. NBC_01755 chromosome, complete genome.
CP109131.1:492890-492909
TGAGAGCGTACGCGTCGATGTGCTGCCGAG492890CCTTGAAATCACTGCCGATTCTTCGTAGCCACCGCACATCGACCCCCAGC
Trifolium repens isolate ACLI19 chromosome 05_Pall.
CP125845.1:51978906-51978925
GGAAAGGGCGGTGGTGATCGGCGACGTTAT51978906AATCGGCAGTGATTTCAAGGGCGGAAGGTGGAGGCGATTGAGAATCGTAT
Streptosporangium sp. NBC_01810 chromosome, complete genome.
CP109070.1:1705857-1705876
GCTGGGGGTCGATGTGCGGTGGCTACGAAG1705857AATCGGCAGTGATTTCAAGGCTCGGCAGCACATCGACGCGTACGCTCTCA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTGAAATCACTGCCGATT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTGAAATCACTGCCGATT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTGAAATCACTGCCGATT&k=0&no_gap=0&offset=0&limit=50
0.203 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AATCGGCAGTGATTTCAAGG&k=0&no_gap=0&offset=0&limit=47
0.204 | 0.001 | cgi_end;

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