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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 11:14:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:4497645-4497666
CCAAACACATTTTCTTCTTCTAATTTTCTT4497645CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTCTTAACTTTCTAAAC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:24958114-24958135
CCAAGCACATTTTCTTCTTCTAATTTTCTT24958114CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTACGC
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:2543648-2543669
CACATTCTCACCTTCCAAACACATTTTCTT2543648CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAT
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141926.1:30494075-30494096
AACACATTTTCTTCTTCTTCTAATTTTCTT30494075CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTGTTAACTTTATACAT
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141930.1:24899107-24899128
CCAAACACATTTTCTTCTTCTAATTTTCTT24899107CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:4698696-4698717
CCAAACACATTTTCTTTTTCTAATTTTCTT4698696CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTACAC
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:25120683-25120704
TTCCAAACATTTTCTTCTTCTAATTTTCTT25120683CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTACTACTACACCAAT
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:2502799-2502820
CACATTCTCACCTTCCAAACACATTTTCTT2502799CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAT
Malus hybrid cultivar cultivar Flame chromosome 17.
CP141943.1:31352971-31352992
CCAAACACATTTTCTTCTTCTAATTTTCTT31352971CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTATACAT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:7725894-7725915
CCAAACACATTTTCTTCTTCTAATTTTCTT7725894CGATACTCATCAAATTTTCTCTGTATCTCTTAAATTTCTTAACTTTCTACAT
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:23690518-23690539
CCAAACACATTTTCTTCTTCTAATTGTCTT23690518CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTTTACAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:4609415-4609436
CCAAACACATTTTCTTCTTCTAATTTTCTT4609415CGATACTCATCAAATTTTCTCTGTATCACGTCAATTTCTTAACTTTCTAAAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:25238917-25238938
CCAAGCACATTTTCTTCTTCTAATTTTCTT25238917CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTACGC
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:8260182-8260203
CCAAACACATTTTCTTCTTCTAATTTTCTT8260182CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAT
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:23377381-23377402
CCAAACACATTTTCTTCTTCTAATTTTCTT23377381CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:4764850-4764871
CCAAACACATTTTCTTTTTCTAATTTTCTT4764850CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:26332649-26332670
CCAAGCACATTTTCTTCTTCTAATTTTCTT26332649CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTACGC
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143361.1:24481027-24481048
CCAAACACATTTTCTTCTTCTAATTTTCTT24481027CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:7624453-7624474
CACATTCTCACATTCCAAACAAATTTTCTT7624453CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143363.1:32526326-32526347
TCCAAACACATTTCTTCTTCTAATTTTCAT32526326CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:4762437-4762458
CCAAACACATTTTCTTTTTCTAATTTTCTT4762437CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:24711717-24711738
CCAAACGCATTTTCTTCTTCTTATTTTCTT24711717CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTATGC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:44634764-44634785
ACAAACACATTTTCTTCTTCTAATTTTATT44634764CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 1.
CP143375.1:21244193-21244214
CTTCCAAATTATTCTTCTTCTAATTTTCTT21244193CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:22953823-22953844
CACATTCTCACCTTCCAAACACATTTTCTT22953823CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:5705386-5705407
GCACATTCTCACATTCAAACACATTTTCTT5705386CGATACTCATCAAATTTTCTCTGTCTCTCTTCAATTTCTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:6672258-6672279
CCAAACAAATTTTCTTCTTTTAATTTTCTT6672258CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:28934200-28934221
TCCAAACACATTTCTTCTTCTAATTTTCTT28934200CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 10.
CP143384.1:37237994-37238015
CCAAACACATTTTCTTCTTCTAATTTTCTT37237994CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTTTAACTTTCTACAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:4513789-4513810
CCAAACACATTTTCTTCTTCTAATTTTCTT4513789CGATACTCATCAAATTTTCTCTGTATCACGTCAATTTCTTAACTTTCTAAAC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:24212958-24212979
CCAAACACATTTTCTTCTTCTAATTTTCTT24212958CGATACTCATCAAATTTTCTCTGTAACTCTTCAATTTCTTATCTTTCTACGC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:24249165-24249186
GGCACATTTTCACCTTCCAAACATTTTCTT24249165CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTACTATCTACACCAA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:39110500-39110521
CCAAACACATTTTCTTCTTCTAATTTTATT39110500CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Pyrus pyrifolia genes for F-box proteins and S3-RNase region, haplotype S3.
LC775246.1:1282476-1282497
CACATTCTCACCTTCCAAACACATTTTCTT1282476CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTCTCTACAC
Pyrus pyrifolia genes for F-box proteins and S4-RNase region, haplotype S4.
LC775247.1:1419113-1419134
CACATTCTCACCTTCCAAACACATTTTCTT1419113CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTCTCTACAC
Malus sylvestris genome assembly, chromosome: 4.
OU696506.1:24767026-24767047
CCAAACACATTTTCTTCTTCTAATTTTCTT24767026CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:7649497-7649518
CACATTCTCACATTCCAAACAAATTTTCTT7649497CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus sylvestris genome assembly, chromosome: 6.
OU696508.1:32040344-32040365
TCCAAACACATTTCTTCTTCTAATTTTCTT32040344CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:4833257-4833278
CCAAACACATTTTCTTTTTCTAATTTTCTT4833257CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:24671326-24671347
TTCCAAACATTTTCTTCTTCTAATTTTCTT24671326CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTACTACTACACCAAT
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:43068547-43068568
ACAAACACATTTTCTTCTTCTAATTTTATT43068547CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 4.
OU696680.1:24780103-24780124
CCAAACACATTTTCTTCTTCTAATTTTCTT24780103CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 6.
OU696682.1:7890085-7890106
CACATTCTCACATTCCAAACAAATTTTCTT7890085CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus domestica genome assembly, chromosome: 6.
OU696682.1:32692231-32692252
TCCAAACACATTTCTTCTTCTAATTTTCAT32692231CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:4859622-4859643
CCAAACACATTTTCTTTTTCTAATTTTCTT4859622CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:25040726-25040747
CCAAACGCATTTTCTTCTTCTTATTTTCTT25040726CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTATGC
Malus domestica genome assembly, chromosome: 15.
OU696691.1:44498738-44498759
ACAAACACATTTTCTTCTTCTAATTTTATT44498738CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 4.
OU744545.1:24677583-24677604
CCAAACACATTTTCTTCTTCTAATTTTCTT24677583CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 6.
OU744547.1:7518139-7518160
CACATTCTCACATTCCAAACAAATTTTCTT7518139CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus domestica genome assembly, chromosome: 6.
OU744547.1:32443869-32443890
TCCAAACACATTTCTTCTTCTAATTTTCTT32443869CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:4935485-4935506
CCAAACACATTTTCTTTTTCTAATTTTCTT4935485CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:25085200-25085221
CCAAACACATTTTCTTCTTCTTATTTTCTT25085200CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTACGC
Malus domestica genome assembly, chromosome: 15.
OU744556.1:44718502-44718523
ACAAACACATTTTCTTCTTCTAATTTTATT44718502CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 4.
OU744956.1:24971874-24971895
CCAAACACATTTTCTTCTTCTAATTTTCTT24971874CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 6.
OU744958.1:7552395-7552416
CACATTCTCACCTTCCAAACAAATTTTCTT7552395CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus domestica genome assembly, chromosome: 6.
OU744958.1:32478480-32478501
TCCAAACACATTTCTTCTTCTAATTTTCAT32478480CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:5000880-5000901
CCAAACACATTTTCTTTTTCTAATTTTCTT5000880CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:24787917-24787938
TTCCAAACATTTTCTTCTTCTAATTTTCTT24787917CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTACTACTACACCAAT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:45167163-45167184
ACAAACACATTTTCTTCTTCTAATTTTATT45167163CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 4.
OU744994.1:24811730-24811751
CCAAACACATTTTCTTCTTCTAATTTTCTT24811730CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCCTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 6.
OU744996.1:7587063-7587084
CACATTCTCACCTTCCAAACAAATTTTCTT7587063CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus domestica genome assembly, chromosome: 6.
OU744996.1:28704386-28704407
TCCAAACACATTTCTTCTTCTAATTTTCTT28704386CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Malus domestica genome assembly, chromosome: 11.
OU745001.1:4829949-4829970
CCAAACACATTTTCTTTTTCTAATTTTCTT4829949CGATACTCATCAAATTTTCTCTGTATCATGTCAATTTTTTAACTTTCTAAAC
Malus domestica genome assembly, chromosome: 11.
OU745001.1:25608151-25608172
CCAAACGCATTTTCTTCTTCTTATTTTCTT25608151CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTATCTTTCTATGC
Malus domestica genome assembly, chromosome: 15.
OU745005.1:44264573-44264594
ACAAACACATTTTCTTCTTCTAATTTTATT44264573CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Malus x robusta genome assembly, chromosome: 11.
OY720335.1:30447717-30447738
AACACATTTTCTTCTTCTTCTAATTTTCTT30447717CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTGTTAACTTTATACAT
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:13323329-13323350
CCAAACACATTTTCTTCTTCTAATTTTCTT13323329CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Malus x robusta genome assembly, chromosome: 12.
OY720336.1:20007492-20007513
CCAAACACATTTCCTTCTTATAATTTTCTT20007492CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTTAACAC
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:7247145-7247166
CACATTCTCACATTCCAAACAAATTTTCTT7247145CGATACTCATCAAATTTTCTCTGTATCTCTTTAATTTCTTAACTTTCTATAC
Malus x robusta genome assembly, chromosome: 14.
OY720338.1:28366669-28366690
TCCAAACACATTTCTTCTTCTAATTTTCTT28366669CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:15627512-15627533
CTAAACACATTTTCTTCTTCTAATTTTCTT15627512CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTCACTTTCTATGC
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:10449024-10449045
CCAAACACATTTTCTTCTTCTAATTTTCTT10449024CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTTTTAACTTTCTACAC
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:11557706-11557727
CCAAACACATTGTCTTCTTCTAATTTTCTT11557706CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTTTAACTTTCTACAC
Crataegus laevigata genome assembly, chromosome: 8.
OY756945.1:11604885-11604906
CACATTCTCACCTTCCAAACACATTTTCTT11604885CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTTTTAACTTTCTACAC
Crataegus laevigata genome assembly, chromosome: 9.
OY756946.1:36936833-36936854
CCAAACACATTTTCTTCTTCTAAATTTTTT36936833CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAT
Crataegus laevigata genome assembly, chromosome: 14.
OY756951.1:13309447-13309468
TCCAAACACATTTCTTCTTCTAATTTTCTT13309447CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Pyrus communis genome assembly, chromosome: 1.
OY757068.1:13632042-13632063
TTCCACACATTATCTTCTTCTAATTTTCTT13632042CGATACTCATCAAATTTTCTCTGTATCTCTTAAATTTCGTAACTTCGTACAC
Pyrus communis genome assembly, chromosome: 5.
OY757072.1:28248533-28248554
CCAAACACATTTTCTTCTTCTAATTTTTTT28248533CGATACTCATCAAATTTTCTCTGTATCTCTTCATTTTCTTAACTTTCTACAC
Pyrus communis genome assembly, chromosome: 10.
OY757077.1:10596523-10596544
CCAAACATATTTTCTTCTTCTCATTTTATT10596523CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Pyrus communis genome assembly, chromosome: 12.
OY757079.1:4741737-4741758
TTTCTCGGCACATTCTCACCTTATTTTCTT4741737CGATACTCATCAAATTTTCTCTATATCTCTTCAATTTCTTAACTTTCTACAC
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:9720129-9720150
CCAAACACATTTTCTTCTTCTAATTTTCTT9720129CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC
Pyrus communis genome assembly, chromosome: 17.
OY757084.1:7183680-7183701
CCAAACACATTTTCTTCTTTTAATTTTCTT7183680CGATACTCATCAAATTTTCTCTGTATCTCTTCAATTTCTTAACTTTCTACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGATACTCATCAAATTTTCTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATACTCATCAAATTTTCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.117 | 0.108 | search_plus_done; http://172.18.8.135:50400/match?q=CGATACTCATCAAATTTTCTCT&k=0&no_gap=0&offset=0&limit=50
0.186 | 0.069 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGAAAATTTGATGAGTATCG&k=0&no_gap=0&offset=0&limit=0
0.186 | 0.000 | cgi_end;

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