GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:54:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dur25.root.ADAA-aaf15f05.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence.
GW932413.1:247-266
ATTTCTAATCATAATCAAACAACACCTCGT247CGATCTGCCAATTTCAAACCTTCTATTTGGCGTTATGATTACATCCAGTC
TSA: Arachis duranensis DurSNP_c35667.Ardu mRNA sequence.
HP035637.1:247-266
ATTTCTAATCATAATCAAACAACACCTCGT247CGATCTGCCAATTTCAAACCTTCTATTTGGCGTTATGATTACATCCAGTC
Arachis hypogaea DNA, clone: 8iHA04J02, cultivar: YI-0311.
DE998540.1:173-192
ATTTCTAATCATAATCAAACAACACCTCGT173CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATTATGATTACATCCG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:62418419-62418438
ATTTCTAATCATAATCAAACAATACCTCGT62418419CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATGATTTCATCCAGTC
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:62531664-62531683
ATTTCTAATCATAATCAAACAACACCTCGT62531664CGATCTGCCAATTTCAAACCTTTTATTTGGCATTATGATTACATCCGGTC
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:58170168-58170187
ATTTCTAATCATAATCAAACAATACCTCGT58170168CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATGATTTCATCCAGTC
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:58284224-58284243
ATTTCTAATCATAATCAAACAACACCTCGT58284224CGATCTGCCAATTTCAAACCTTTTATTTGGCATTATGATTACATCCGGTC
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:75377927-75377946
CGGATGTAATCATAATAATGCCAAATAGAA75377927GGTTTGAAATTGGCAGATCGACGAGGTGTTGTTTGATTATGATTAGAAAT
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:75383843-75383862
GACTGGATGTAATCATAATGCCAAATAGAA75383843GGTTTGAAATTGGCAGATCGACGAGGTGTTGTTTGATTATGATTAGAAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGATCTGCCAATTTCAAACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATCTGCCAATTTCAAACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.245 | 0.236 | search_plus_done; http://172.18.8.135:50400/match?q=CGATCTGCCAATTTCAAACC&k=0&no_gap=0&offset=0&limit=50
0.278 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTTGAAATTGGCAGATCG&k=0&no_gap=0&offset=0&limit=43
0.279 | 0.001 | cgi_end;

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