GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-17 15:58:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

S.oleracea mRNA for protein kinase.
X73298.1:2458-2481
AGAGAGAGAGGAAGAGGTACATAAATGGAT2458CGATTAGGGTATTTTTAGTGTTGCTTCTACGTTTAGTGAAGGACACTTTTGTAT
S.oleracea mRNA for protein kinase.
Z30332.1:2343-2366
AGAGAGAGAGGAAGAGGTACATAAATGGAT2343CGATTAGGGTATTTTTAGTGTTGCTTCTACGTTTAGTGAAGGACACTTTTGTAT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:189719167-189719190
ATACAAAAGTGTCCTTCACTAAACGTAGAA189719167GCAACACTAAAAATACCCTAATCGATCCATTTATGTACCTCTTCCTCTCTCTCT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:192742445-192742468
ATACAAAAGTGTCCTTCACTAAACGTAGAA192742445GCAACACTAAAAATACCCTAATCGATCCATTTATGTACCTCTTCCTCTCTCTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGATTAGGGTATTTTTAGTGTTGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATTAGGGTATTTTTAGTGTTGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CGATTAGGGTATTTTTAGTGTTGC&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=GCAACACTAAAAATACCCTAATCG&k=0&no_gap=0&offset=0&limit=48
0.115 | 0.002 | cgi_end;

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