GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 12:22:26, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA clone:PS020b07_r, 5' end.
AV437355.1:426-445
TGACCCGCACCGCGGCGATGGCTGAGACGG426CGCTCGAAAACTTCCTTGAGGTGGTCAAGAACGAAGCGCAGCCGTCGCCA
Bradyrhizobium sp. WBOS01 chromosome.
CP028985.1:1770259-1770278
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1770259CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Bradyrhizobium sp. WBOS02 chromosome.
CP028986.1:1961861-1961880
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1961861CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Bradyrhizobium betae strain WBOS16 chromosome.
CP028989.1:1834166-1834185
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1834166CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Bradyrhizobium sp. WBOS07 chromosome.
CP029008.1:1828889-1828908
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1828889CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Bradyrhizobium guangdongense strain CCBAU 51649 chromosome, complete genome.
CP030051.1:1215567-1215586
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1215567CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Bradyrhizobium guangdongense strain CCBAU 51658 chromosome, complete genome.
CP030057.1:1214179-1214198
ACGACCTTCAAGGAAGCCAAGCTGGGCCGT1214179CGCTCGAAAACTTCCTTGAGCAGCTCCTCGGTTTGGCACGCGACGGAGCG
Phyllotreta cruciferae genome assembly, chromosome: 16.
OU830621.1:1874993-1875012
AAATTTAATTTGAGGCCAGCCTGTCTGAAT1874993CGCTCGAAAACTTCCTTGAGGTTAGCCAAATGCTCTTGGGCATTTTTCCC
Bradyrhizobium icense strain LMTR 13 chromosome, complete genome.
CP016428.1:5193971-5193990
CGCTCCATCGCGCGCCAAACCGAGGAGCTG5193971CTCAAGGAAGTTTTCGAGCGACGGCCCGGCTTGGTTTCCTTGAAGGTCGT
Merzomyia westermanni genome assembly, chromosome: 3.
OX465290.1:129680585-129680604
AGTGCTACATTGGAAGAGCACATAAGGCAT129680585CTCAAGGAAGTTTTCGAGCGACTAAGCGAGCAAATTTAAAAATTAACCCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGCTCGAAAACTTCcTTGAg
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCTCGAAAACTTCcTTGAg | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CGCTCGAAAACTTCCTTGAG&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=CTCAAGGAAGTTTTCGAGCG&k=0&no_gap=0&offset=0&limit=42
0.129 | 0.001 | cgi_end;

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