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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 02:15:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Sequence 155 from Patent WO03052141.
AX795586.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
Sequence 156 from Patent WO03052141.
AX795587.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
Sequence 157 from Patent WO03052141.
AX795588.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
Sequence 158 from Patent WO03052141.
AX795589.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
Sequence 165 from Patent WO03052141.
AX795596.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
Sequence 166 from Patent WO03052141.
AX795597.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
Sequence 155 from Patent WO03052142.
AX796878.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
Sequence 156 from Patent WO03052142.
AX796879.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
Sequence 157 from Patent WO03052142.
AX796880.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
Sequence 158 from Patent WO03052142.
AX796881.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
Sequence 165 from Patent WO03052142.
AX796888.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
Sequence 166 from Patent WO03052142.
AX796889.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
Sequence 155 from Patent WO03052140.
AX797140.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
Sequence 156 from Patent WO03052140.
AX797141.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
Sequence 157 from Patent WO03052140.
AX797142.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
Sequence 158 from Patent WO03052140.
AX797143.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
Sequence 165 from Patent WO03052140.
AX797150.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
Sequence 166 from Patent WO03052140.
AX797151.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
Sequence 11 from Patent WO2004111271.
CQ975950.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
Sequence 12 from Patent WO2004111271.
CQ975951.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
Sequence 13 from Patent WO2004111271.
CQ975952.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
Sequence 14 from Patent WO2004111271.
CQ975953.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
Sequence 21 from Patent WO2004111271.
CQ975960.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
Sequence 22 from Patent WO2004111271.
CQ975961.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
Sequence 36 from Patent WO2004111271.
CQ975975.1:56-74
ATGTCGACGTAGATCCGTATAGCACTGAGT56CGGGAATTGGTACGCAGTCCGCGGGCGCGCGGCGGGCGG
Sequence 39 from Patent WO2004111271.
CQ975978.1:52-70
GACTGTACGCATGCTAACGTTACGGACTAT52CGGGAATTGGTACGCAGTCCGCGGCGCCCGCGGCGCGGG
Sequence 68 from Patent WO2005021794.
CS050969.1:56-74
ATGTCGACGTAGATCCGTATAGCACTGAGT56CGGGAATTGGTACGCAGTCCGCGGGCGCGCGGCGGGCGG
Sequence 71 from Patent WO2005021794.
CS050972.1:52-70
GACTGTACGCATGCTAACGTTACGGACTAT52CGGGAATTGGTACGCAGTCCGCGGCGCCCGCGGCGCGGG
Sequence 53 from Patent EP1602733.
CS227494.1:109-127
GGAAGTAAATTCAACGTGGGTCTCCGGTAC109CGGGAATTGGTACGCAGTCCTGGAAGTATTCAGAGTTTAGAGTGAA
Sequence 55 from Patent EP1602733.
CS227496.1:104-122
GAAATCGGGCACAGGCTTAGCGCTCAGAAA104CGGGAATTGGTACGCAGTCCAGCAAAGAATTAGACATGGATGAGTT
Sequence 59 from Patent EP1602733.
CS227500.1:94-112
CTTATAAATCACTCTTTCATTGCGCGACGC94CGGGAATTGGTACGCAGTCCCTTCATATTGATGGTTTTGTTTTTGTTA
Sequence 62 from Patent EP1602733.
CS227503.1:103-121
GTGGTGCCTGCCGCACGTAAGGCCTCATGT103CGGGAATTGGTACGCAGTCAGCTTTGCAACAGCAGAAGTGTAC
Sequence 67 from Patent EP1602733.
CS227508.1:90-108
GCCGACAGCGTCGCGAGAGCACCTAAATGT90CGGGAATTGGTACGCAGTCCCATGTATGCATGATTGGCGGTCCA
Sequence 53 from Patent WO2005118847.
CS239483.1:109-127
GGAAGTAAATTCAACGTGGGTCTCCGGTAC109CGGGAATTGGTACGCAGTCCTGGAAGTATTCAGAGTTTAGAGTGAA
Sequence 55 from Patent WO2005118847.
CS239485.1:104-122
GAAATCGGGCACAGGCTTAGCGCTCAGAAA104CGGGAATTGGTACGCAGTCCAGCAAAGAATTAGACATGGATGAGTT
Sequence 59 from Patent WO2005118847.
CS239489.1:94-112
CTTATAAATCACTCTTTCATTGCGCGACGC94CGGGAATTGGTACGCAGTCCCTTCATATTGATGGTTTTGTTTTTGTTA
Sequence 62 from Patent WO2005118847.
CS239492.1:103-121
GTGGTGCCTGCCGCACGTAAGGCCTCATGT103CGGGAATTGGTACGCAGTCAGCTTTGCAACAGCAGAAGTGTAC
Sequence 67 from Patent WO2005118847.
CS239497.1:90-108
GCCGACAGCGTCGCGAGAGCACCTAAATGT90CGGGAATTGGTACGCAGTCCCATGTATGCATGATTGGCGGTCCA
JP 2005512549-A/155: Analysis and detection of multiple target sequences using circular probes.
DD175749.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
JP 2005512549-A/156: Analysis and detection of multiple target sequences using circular probes.
DD175750.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
JP 2005512549-A/157: Analysis and detection of multiple target sequences using circular probes.
DD175751.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
JP 2005512549-A/158: Analysis and detection of multiple target sequences using circular probes.
DD175752.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
JP 2005512549-A/165: Analysis and detection of multiple target sequences using circular probes.
DD175759.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
JP 2005512549-A/166: Analysis and detection of multiple target sequences using circular probes.
DD175760.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
JP 2006527597-A/11: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462200.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTGATCCGATCG
JP 2006527597-A/12: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462201.1:25-43
GTACAATGCAATTTAGAGAACAAG25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCATCCGATCGAT
JP 2006527597-A/13: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462202.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCACCATGTCGAC
JP 2006527597-A/14: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462203.1:23-41
CTTAACACGTCCAGACAAGAGG23CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCCCATGTCGACG
JP 2006527597-A/21: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462210.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCTCGCTAACGTT
JP 2006527597-A/22: Means and method for the detection of target nucleotide sequences using ligation assays with improved oligonucleotide probe pairs.
DD462211.1:25-43
GAACTATAAATTGCTTGCAGGAAC25CGGGAATTGGTACGCAGTCGATGAGTCCTGAGTAACGCGCTAACGTTAC
Quercus petraea/Quercus robur mixed clone library EST, clone 1K832tot.
FR877899.1:118-136
AGACCTGAACGATGTCGTCTGTGCAATTCT118CGGGAATTGGTACGCAGTCA
TDF0367a Oncidium hybrid cultivar Milliongolds flower development cDNA-AFLP Oncidium hybrid cultivar cDNA clone TDF0367, mRNA sequence.
JG014430.1:105-123
AAAACGCTTGCACTGTCGTCATGACCAGGC105CGGGAATTGGTACGCAGTCATGATGAGTCCTGAGTAAATGTGTGCGTAA
CBFi49 cDNA-AFLP library of common bean roots infected by Fusarium oxysporum f.sp. phaseoli Phaseolus vulgaris cDNA clone 49, mRNA sequence.
JZ469060.1:347-365
GAAAATTCAGAAACAGGTGAAAGCCTCAAA347CGGGAATTGGTACGCAGTCA
Lhlrnq44 Genomic sequences from Lactobacillus casei subsp. rhamnosus W4-3-9 with AFLP method Lactobacillus rhamnosus genomic similar to Excinuclease ABC, subunit A, genomic survey sequence.
HN148495.1:221-239
CCATTGCGCTCAGACAGCGGCCTGTTGTTC221CGGGAATTGGTACGCAGTC
Lhlrnq49 Genomic sequences from Lactobacillus casei subsp. rhamnosus W4-3-9 with AFLP method Lactobacillus rhamnosus genomic similar to hypothetical protein LC705_02660, genomic survey sequence.
HN148500.1:106-124
GAATCACCTGCCTAATCGCTCAACCAGATC106CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_9673 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS798102.1:127-145
ACGACGGTGACATCACGGTAGTTGACGCAA127CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_17493 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS804435.1:27-45
TCCTGAGTAATCAGTGATTCCATCTC27CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_19828 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS806430.1:59-77
ATTACATTCTCAGACATTCAGATAACGGTC59CGGGAATTGGTACGCAGTCTCCTGAGTAATCTATCTTATGTAGCCGGAA
Barcode_AGTCAA_contig_25696 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS811631.1:272-290
GATACAAAATAAAAATATTAAGCAGCAAGG272CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_34513 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS819028.1:321-339
TCTGCCACAGAGGTCTGCGATCACGTAATC321CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_48006 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS830044.1:230-248
TGAGTAATCCTGTAATGCGCAATATCCGTA230CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_70378 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS848986.1:252-270
GTAAGTGTTTAGACGAAGGCGTCAACATTC252CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_83618 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS860322.1:119-137
TTTTTGCGCCTGTTTGGCCCCTTCCGTGCC119CGGGAATTGGTACGCAGTCTGCTGATAAACCGCTTTGGCTTTCGCAGTG
Barcode_AGTCAA_contig_93028 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS869166.1:492-510
GCCACCGGAACAGTTCTCCAACAGAATAGC492CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_95152 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS871010.1:561-579
TTCCATCCACCGACGCAATGGCAATATCTT561CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_95162 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS871019.1:413-431
CAAATCAACACCATCCAAGGCCTTGACGCC413CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_97691 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS872953.1:207-225
ATGAGTCCTGAGTAATGCTGCCACCACTTT207CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_143143 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS914009.1:317-335
GATATCCTTTGGTAGGCTTTGACGCCCCCG317CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_143763 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS914599.1:535-553
AGAGATATGTTCTGAAAGTGTGAGTCCTTT535CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_168013 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS936410.1:181-199
CTCTGCAAGATCACTTACATAAAAGCGATA181CGGGAATTGGTACGCAGTC
Barcode_AGTCAA_contig_175550 AFLP mother child gut associated microbiota uncultured bacterium genomic, genomic survey sequence.
KS943424.1:75-93
GTAACTAAATATAAAACATTCCGGGGGGAG75CGGGAATTGGTACGCAGTCTATGATGAGTCCTGAGAAATATGCCTACAC
Glycine max cultivar Forrest chromosome A2 map between BARC-SAT162 and BLT65, sequence tagged site.
AF286700.1:391-409
ACGAGACCAAGAGAAACTCCTCGGAAGCAA391CGGGAATTGGTACGCAGTC
Glycine max cultivar Essex chromosome A2 map between BARC-SAT162 and BLT65, sequence tagged site.
AF286701.1:399-417
CCGAGACCAAGAGAAACTCCTCGGAAGCAA399CGGGAATTGGTACGCAGTC
Humulus scandens male-specific AFLP fragment E60M14-1 genomic sequence.
KX428520.1:374-392
GTTATTGACCTATGTGGCTGCCAACGTGGG374CGGGAATTGGTACGCAGTC
Humulus scandens male-specific AFLP fragment E60M14-2 genomic sequence.
KX428521.1:201-219
ACGACCCGGTTTCCGTGTTAGGCTTCGTGC201CGGGAATTGGTACGCAGTC
Penaeus monodon clone 098 AFLP marker mRNA sequence.
DQ132975.1:32-50
AGACTATAGTAGCCAGTAAATACCCGTCTC32CGGGAATTGGTACGCAGTCGTGATGAGTCCTGAGTAACAGTTGGTTGTG
Eimeria maxima AFLP fragment Em_H173, strain Houghton.
FN823272.1:858-876
TAGGCTGAGCTTCAAAAAGGACGTCAGAAA858CGGGAATTGGTACGCAGTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGGAATTGGTACGCAGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGGAATTGGTACGCAGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.302 | 1.294 | search_plus_done; http://172.18.8.135:50400/match?q=CGGGAATTGGTACGCAGTC&k=0&no_gap=0&offset=0&limit=50
1.371 | 0.069 | search_minus_done; http://172.18.8.135:50400/match?q=GACTGCGTACCAATTCCCG&k=0&no_gap=0&offset=0&limit=0
1.371 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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