GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 00:05:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CES07M01, 5' end sequence.
FY385028.1:597-616
GAGGAGGAGGAGGATGAGAACCGTCGAAAG597CGGGCAAATGAGAGGTTTATTCAGGAGGATGAAGATGAGGAGGAGGAGGA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.627.C1.
FX297815.1:596-615
GAGGAGGAGGAGGATGAGAACCGTCGAAAG596CGGGCAAATGAGAGGTTTATTCAGGAGGATGAAGATGAGGAGGAGGAGGA
TSA: Dianthus caryophyllus mRNA, contig: CAK09.627.C2.
FX297816.1:374-393
AGGAGGAGGAGGATGAGAACCGTACGAAAG374CGGGCAAATGAGAGGTTTATTCAGGAGGAATGAAGATGAGGAGGAGGAGG
Tortricodes alternella genome assembly, chromosome: 15.
OX401983.1:12632602-12632621
ATACATATTACGTTCTCAAATCAAAAACAC12632602CGGGCAAATGAGAGGTTTATGATAAGTATATAGTGGTCCAATAAGAAATG
Sorghum bicolor cultivar Hongyingzi chromosome 3.
CP137827.1:77691592-77691611
ATTAACATAGTAGATTGTAACAATCCGACT77691592ATAAACCTCTCATTTGCCCGTAGCAGATTGTAAAAATTGCATATGACCAA
Sorghum bicolor cultivar Huandiaonuo chromosome 3.
CP137837.1:78085505-78085524
ATTAACATAGTAGATTGTAACAATCCGACT78085505ATAAACCTCTCATTTGCCCGTAGCAGATTGTAAAAATTGCATATGACCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGGCAAATGAGAGGTTTAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGGCAAATGAGAGGTTTAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.185 | 0.177 | search_plus_done; http://172.18.8.135:50400/match?q=CGGGCAAATGAGAGGTTTAT&k=0&no_gap=0&offset=0&limit=50
0.214 | 0.029 | search_minus_done; http://172.18.8.135:50400/match?q=ATAAACCTCTCATTTGCCCG&k=0&no_gap=0&offset=0&limit=46
0.216 | 0.001 | cgi_end;

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