GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:34:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Porphyra yezoensis cDNA, clone:PF025f08_r, 5'end.
AU188412.1:275-294
GGCCACCACTGCCGCCGACGTTGATCCCGT275CGTGACTTGTGACGACATCCGCCGGCGCGGGGCGGCCATGTCGGCCGTAT
Neopyropia yezoensis NyHSP110 mRNA for HSP110 protein, complete cds.
LC764587.1:2853-2872
GGCCACCACTGCCGCCGACGTTGATCCCGT2853CGTGACTTGTGACGACATCCGCCGGCGCGGGGCGGCCATGTCGGCCGTAT
Sherardia arvensis genome assembly, chromosome: 9.
OX415244.1:20582871-20582890
TTGCCTTTTCAGCAACGGAAAGTATTGCCG20582871CGTGACTTGTGACGACATCCATTCGCTAGAAGCGGATACAGAAGTTTATG
Sherardia arvensis genome assembly, chromosome: 6.
OX415240.1:22130194-22130213
CTGAAACTTCCGTATCCGCCTCTAGCGAAT22130194GGATGTCGTCACAAGTCACGCGGCAATACTTCCCGTCGCTGAAAAGGCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTGACTTGTGACGACATCC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGACTTGTGACGACATCC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.112 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGACTTGTGACGACATCC&k=0&no_gap=0&offset=0&limit=50
0.130 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=GGATGTCGTCACAAGTCACG&k=0&no_gap=0&offset=0&limit=47
0.131 | 0.001 | cgi_end;

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