GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:10:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus x robusta genome assembly, chromosome: 5.
OY720329.1:32008184-32008204
TAAGGTCAGTGGAAGTACTTACTTGTTTTA32008184CGTGGGTGAAAGTGAAAGTTTGACAACTTTGAAGTGAAATGTCAGAAAATG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:8977412-8977432
CATTTTCTGACATTTCACTTCAAAGTTGTC8977412AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:9804922-9804942
CATTTTCTGACATTTCACTTCAAAGTTGTC9804922AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:9188823-9188843
CATTTTCTGACATTTCACTTCAAAGTTGTC9188823AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:10007582-10007602
CATTTTCTGACATTTCACTTCAAAGTTGTC10007582AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:9099479-9099499
CATTTTCTGACATTTCACTTCAAAGTTGTC9099479AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9218808-9218828
CATTTTCTGACATTTCACTTCAAAGTTGTC9218808AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus domestica genome assembly, chromosome: 11.
OU696687.1:9903799-9903819
CATTTTCTGACATTTCACTTCAAAGTTGTC9903799AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:9949126-9949146
CATTTTCTGACATTTCACTTCAAAGTTGTC9949126AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:9720842-9720862
CATTTTCTGACATTTCACTTCAAAGTTGTC9720842AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:9823379-9823399
CATTTTCTGACATTTCACTTCAAAGTTGTC9823379AAACTTTCACTTTCACCCACGTAAAACAAGTAAGTACTTCCACTGACCTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTGGGTGAAAGTGAAAGTTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGGGTGAAAGTGAAAGTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.090 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGGGTGAAAGTGAAAGTTT&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=AAACTTTCACTTTCACCCACG&k=0&no_gap=0&offset=0&limit=49
0.121 | 0.006 | cgi_end;

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