GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 03:02:42, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

NF052B05PL1F1042 Phosphate starved leaf Medicago truncatula cDNA clone NF052B05PL 5', mRNA sequence.
BG458092.1:566-589
ATGGATCCATTGAAGCTATCCTACGAAGCG566CGTGTGCACGCGTCACAGAACAAACGGTTACCGGGTACAGATTGNTTTACACGC
Medicago truncatula clone MTYFL_FM_FN_FO1G-N-19 unknown mRNA.
BT053082.1:966-989
ATGGATCCATTGAAGCTATCCTACGAAGCG966CGTGTGCACGCGTCACAGAACAAACGGTTACCGGTACAGATTGTTTTACACGCG
Medicago truncatula clone JCVI-FLMt-22M18 unknown mRNA.
BT145782.1:1400-1423
ATGGATCCATTGAAGCTATCCTACGAAGCG1400CGTGTGCACGCGTCACAGAACAAACGGTTACCGGGTACAGATTGTTTTACACGC
M.truncatula DNA sequence from clone MTH2-97H11 on chromosome 3.
CU468280.5:5089-5112
ATGGATCCATTGAAGCTATCCTACGAAGCG5089CGTGTGCACGCGTCACAGAACAAACGGTTACCGGTACAGATTGTTTTACACGCG
Trifolium dubium genome assembly, chromosome: 8.
OX638069.1:8130486-8130509
ATGGACGCGCTGAAACTATCATACGAGGCG8130486CGTGTGCACGCGTCACAGAACAAACGGTTACCGGTGCAAATTGTGCTTCACGCG
Medicago truncatula clone mth2-151m16, complete sequence.
AC147002.20:19837-19860
CGCGTGTAAAACAATCTGTACCGGTAACCG19837TTTGTTCTGTGACGCGTGCACACGCGCTTCGTAGGATAGCTTCAATGGATCCAT
Lupinus angustifolius cultivar Tanjil voucher WA chromosome LG-09.
CP023121.1:24137165-24137188
CGCGTGAAGAACAATTTGAACTGGTAATCG24137165TTTGTTCTGTGACGCGTGCACACGCGCCTCGTAAGAAAGTTTTAGCGGGTCCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTGTGCACGCGTCACAGAACAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGTGCACGCGTCACAGAACAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGTGCACGCGTCACAGAACAAA&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGTTCTGTGACGCGTGCACACG&k=0&no_gap=0&offset=0&limit=45
0.130 | 0.001 | cgi_end;

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