GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 07:58:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Pseudo-nitzschia sp. XChen-2010a isolate CNS00090 chloroplast, complete genome.
MW853965.1:75367-75387
GACTTCATAATCCAAAGTTTTTTGATTTCA75367CGTTCTTTTCAAAACCCAAAAAGATAATATGGTTTTCTAAACTGTTAATAT
TSA: Allium cepa CUDHLF2_2861 mRNA sequence.
JR845679.1:313-333
TGAGATTCTATTTGGAACAGTTCTTTCCTT313TTTTGGGTTTTGAAAAGAACGTAGAAGGCTTTGTTGAGATTCTATTTGAAC
Pseudo-nitzschia sp. XChen-2010a isolate CNS00090 chloroplast, complete genome.
MW853965.1:124533-124553
ATATTAACAGTTTAGAAAACCATATTATCT124533TTTTGGGTTTTGAAAAGAACGTGAAATCAAAAAACTTTGGATTATGAAGTC
Sambucus nigra genome assembly, chromosome: 15.
OX422221.1:226461017-226461037
TTAAACTCCAATTTGGAGTTGGTTTTGTGA226461017TTTTGGGTTTTGAAAAGAACGGTTATATTTAGGCTCAAAGGAGTTGACGAG
Xanthogramma pedissequum genome assembly, chromosome: 3.
OU343162.1:99546963-99546983
AATTGTGTTTGGTACAAACCATAACAATAC99546963TTTTGGGTTTTGAAAAGAACGATTTGGGATCTAATCTCTTTTTGTGATTGT
Leptura quadrifasciata genome assembly, chromosome: 9.
OY776681.1:29928592-29928612
ACCATAACCTCAACTATAACGAGGTTAAGA29928592TTTTGGGTTTTGAAAAGAACGTTCAAAAAAGAACTTTTCTGGAAATGTGTC
Phaonia tiefii genome assembly, chromosome: 5.
OZ008371.1:8337621-8337641
AAAGTCTATAACTTTTGGGTTCATAAACAT8337621TTTTGGGTTTTGAAAAGAACGATTGTAGGCAAGGAATCAAGGATTATCGAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTTCTTTTCAAAACCCAAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTCTTTTCAAAACCCAAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTCTTTTCAAAACCCAAAA&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=TTTTGGGTTTTGAAAAGAACG&k=0&no_gap=0&offset=0&limit=49
0.146 | 0.004 | cgi_end;

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