GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 12:58:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:62784405-62784424
GAATATTAAAACTTAATTATTGATGTACAT62784405CGTTGGGTTTGTTATCATGTGCTTTTTTAAAGTATTGAATGTGAAGTCCT
Staphylococcus chromogenes strain 1401 plasmid unnamed1.
CP046029.1:44294-44313
CCCCTTTAAACGTGGAAAAATCATGGGAAT44294CGTTGGGTTTGTTATCATGTTTGCGCCAACTATTGGCCCAACGCTATCTG
Staphylococcus equorum strain FDAARGOS_1149 plasmid unnamed1, complete sequence.
CP068070.1:9265-9284
CCCCTTTAAACGTGGAAAAATCATGGGAAT9265CGTTGGGTTTGTTATCATGTTTGCGCCAACTATTGGCCCAACGCTATCTG
Mucilaginibacter sabulilitoris strain SNA2 chromosome, complete genome.
CP139558.1:2860181-2860200
TCAGGTTATCATCGTCGTCTACCCGGTAAG2860181CGTTGGGTTTGTTATCATGTTGTTCCGGATCATGATCATCATTCTGGAAC
Lotus japonicus genomic DNA, chromosome 4, clone: LjB15O07, BM1698.
AP009629.1:53784-53803
AGGACTTCACATTCAATACTTTAAAAAAGC53784ACATGATAACAAACCCAACGATGTACATCAATAATTAAGTTTTAATATTC
Staphylococcus equorum strain DSM 20674 plasmid unnamed1, complete sequence.
CP118983.1:14734-14753
CAGATAGCGTTGGGCCAATAGTTGGCGCAA14734ACATGATAACAAACCCAACGATTCCCATGATTTTTCCACGTTTAAAGGGG
Staphylococcus xylosus macrolide resistance plasmid pJW2311 mph(C), msrA and erm(48) genes, strain JW2311.
LT223129.1:7059-7078
CAGATAGCGTTGGGCCAATAGTTGGCGCAA7059ACATGATAACAAACCCAACGATTCCCATGATTTTTCCACGTTTAAAGGGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTTGGGTTTGTTATCATGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTGGGTTTGTTATCATGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CGTTGGGTTTGTTATCATGT&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=ACATGATAACAAACCCAACG&k=0&no_gap=0&offset=0&limit=46
0.114 | 0.002 | cgi_end;

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