GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2026-01-08 19:18:16, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica rapa subsp. pekinensis GSS, clone KBrH059H18, end read, primer SP6.
AJ859439.1:382-403
ATAAGAGGAGCTGTTTTCAGTATTTACTTT382CGTTTGAGTTTGGTTAAAAGCATGATTTCTTTTTGGTCAAACATGATTTTTG
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH015L23, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces.
AC232555.1:16432-16453
ATAAGAGGAGCTGTTTTCAGTATTTACTTT16432CGTTTGAGTTTGGTTAAAAGCATGATTTCTTTTTGGTCAAACATGATTTTTG
Brassica rapa subsp. pekinensis DNA, chromosome: Linkage group A5, BAC clone: KBrS005M06.
AP011509.1:115667-115688
ACAAAAATCATATTTGACCAAAAAAAATCA115667TGCTTTTAACCAAACTCAAACGAAAGTAAATACTGAAAACAGCTCCTCTTAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTTTGAGTTTGGTTAAAAGCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTTTGAGTTTGGTTAAAAGCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50800/match?q=CGTTTGAGTTTGGTTAAAAGCA&k=0&no_gap=0&offset=0&limit=50
0.146 | 0.033 | search_minus_done; http://172.18.8.135:50800/match?q=TGCTTTTAACCAAACTCAAACG&k=0&no_gap=0&offset=0&limit=48
0.146 | 0.001 | cgi_end;

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