GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:33:31, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Fraxinus pennsylvanica genome assembly, chromosome: 6.
OU503041.1:24498752-24498771
AATTTTAAAACAATGGGAGAGCAGCTTATT24498752CTAACCTGAATGTCGACAGGAAACTTGGAAACTGTATCTGATAAAGCAGC
Fraxinus pennsylvanica genome assembly, chromosome: 15.
OU503050.1:24789061-24789080
AATGTTAAAACAATGGGAGAGCATCATATT24789061CTAACCTGAATGTCGACAGGAAACTTGGAAACGGTATCTGATAATGCAGC
JP 2022104707-A/1: Determining methods of carotenoid content in citrus fruits.
PA551512.1:2842-2861
GCTGGATTATCAGATACAGTAACCAAATTT2842CCTGTCGACATTCAGGTTAGACTATGTTTTCAAGATCAAATTAGATTTTA
Citrus reshni phytoene synthase gene, partial cds.
JX630080.1:56-75
GCTGCATTATCAGATACAGTAACCAAATTT56CCTGTCGACATTCAGGTTAGACTATGTTTTCAAGATCAAATTAKATTTTA
Citrus sinensis genome assembly, chromosome: 9.
OY754326.1:4025461-4025480
GCTGGATTATCAGATACAGTAACCAAATTT4025461CCTGTCGACATTCAGGTTAGACTATGTTTTCAAGATCAAATTAGATTTTA
Dryas octopetala genome assembly, chromosome: 4.
OY992835.1:1447848-1447867
GCTGCTTTGTCAAATACAGTTACCAAATTT1447848CCTGTCGACATTCAGGTTAGAATTACTGTCAAAGTATTATATGACGGAAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAACCTGAATGTCGACAGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAACCTGAATGTCGACAGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CTAACCTGAATGTCGACAGG&k=0&no_gap=0&offset=0&limit=50
0.228 | 0.133 | search_minus_done; http://172.18.8.135:50400/match?q=CCTGTCGACATTCAGGTTAG&k=0&no_gap=0&offset=0&limit=48
0.231 | 0.003 | cgi_end;

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