GGGenome | Results

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2025-04-11 01:37:36, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Pyrus pyrifolia cultivar Housui mRNA, clone: TsuENH063_02148m, 5' end sequence.
AB450734.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_09, 5' end sequence, expressed in fruit.
HX745710.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_12, 5' end sequence, expressed in fruit.
HX745713.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_14, 5' end sequence, expressed in fruit.
HX745715.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_27, 5' end sequence, expressed in fruit.
HX745727.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_34, 5' end sequence, expressed in fruit.
HX745733.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_39, 5' end sequence, expressed in fruit.
HX745738.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_01_48, 5' end sequence, expressed in fruit.
HX745746.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus pyrifolia mRNA, clone: NFR1_06_06, 5' end sequence, expressed in fruit.
HX746146.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

TSA: Pyrus pyrifolia mRNA, contig: contig_1448.
FX432614.1:20-42

ATCTCCTCTCTCTCACTAT20CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

TSA: Pyrus x bretschneideri Unigene30248_XinShao mRNA sequence.
JR623303.1:92-114

CACCAGTCACAATCTCCTCTCTCTCACTAT92CTAACGAACAGAAGGGAAAACGAAAAACCGAGACGGTGGTGATCAAAATTCAA

Pyrus communis genome assembly, chromosome: 17.
OY757084.1:6259169-6259191

TTGAATTTTGATCACCACCGTCTCGGTTTT6259169TCGTTTTCCCTTCTGTTCGTTAGATAGTGAGAGAGAGGAGAATGTGACTGGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTAACGAACAGAAGGGAAAACGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTAACGAACAGAAGGGAAAACGA | format : html | download : | debug :

0.009 | 0.009 | search_start;
1.022 | 1.014 | search_plus_done; http://172.18.8.135:50400/match?q=CTAACGAACAGAAGGGAAAACGA&k=0&no_gap=0&offset=0&limit=50
1.058 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=TCGTTTTCCCTTCTGTTCGTTAG&k=0&no_gap=0&offset=0&limit=39
1.058 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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