GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:28:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

pOP-CNIP00019_EST_C_1_pSK_SK CNI (Oil Palm Non-Embryogenic Callus) Elaeis guineensis cDNA clone pOP-CNIP00019 5', mRNA sequence.
EY404552.1:374-393
TGACATGGAACGTGATCTGCTTACCCCAAC374CTACAAGAAGAAGCGGCCACAGTTGCTCAAGTACTACCAGATGGTTATTA
Darwinula stevensoni.
LR903804.1:21240-21259
CCCGACCAAACATGCGATTCCGATGCCGAC21240CTACAAGAAGAAGCGGCCACGGACCAGGAGCCCCCAAAGCAGATCAACCG
rhnycca0_0004_B07 Three development stage Cocos nucifera endosperm by Suppression subtractive hybridization (SSH) method Cocos nucifera cDNA, mRNA sequence.
JZ534040.1:150-169
CGAGAAGAGGGAGGACGTACTTGAGCAACT150GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTCCCATGTCA
Elaeis guineensis EST, clone (6lib)_isotig17751.
LM617564.1:33-52
TAATAACCATCTGGTAGTACTTGAGCAACT33GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTTCCATGTCA
TSA: Elaeis guineensis isotig11658.Elguifruit mRNA sequence.
JO098885.1:192-211
TAATAACCATCTGGTAGTACTTGAGCAACT192GTGGCCGCTTCTTCTTGTAGGTTGGGGTAAGCAGATCACGTTCCATGTCA
UNVERIFIED_CONTAM: Avena longiglumis isolate 447 chromosome 4.
CP125976.1:54794168-54794187
CCGCCTGCCTACTTCCTCGCTGACCCTGTT54794168GTGGCCGCTTCTTCTTGTAGGCCGCACCTGAACACGGGAAGGACACTGCG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTACAAGAAGAAGCGGCCAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTACAAGAAGAAGCGGCCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.160 | 0.151 | search_plus_done; http://172.18.8.135:50400/match?q=CTACAAGAAGAAGCGGCCAC&k=0&no_gap=0&offset=0&limit=50
0.352 | 0.193 | search_minus_done; http://172.18.8.135:50400/match?q=GTGGCCGCTTCTTCTTGTAG&k=0&no_gap=0&offset=0&limit=48
0.355 | 0.003 | cgi_end;

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