GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 14:49:12, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MUC4LC1007_C09_.b_066. Musa acuminata leaves COLD stress Musa acuminata subsp. burmannicoides cDNA 5', mRNA sequence.
DN239572.1:525-544
TGCGGGGTATCAAACAGTATACTGTGTGAA525CTACGGCTTCAGAAGGATGCTTGAAACGTATATATATATATATATATATA
Embrapa_Mbalbisiana_PKW_Leaf_010_d05_b Embrapa_Musa balbisiana_PKW_Leaf Musa balbisiana cDNA, mRNA sequence.
FL646937.1:685-704
TGCGGGGTATCAAACAGTATACTGTGTGAA685CTACGGCTTCAGAAGGATGCTTGAAACGTATTTATATATATGTCTTGCTT
Embrapa_Mbalbisiana_PKW_Leaf_010_e09_b Embrapa_Musa balbisiana_PKW_Leaf Musa balbisiana cDNA, mRNA sequence.
FL646953.1:668-687
TGCGGGGTATCAAACAGTATACTGTGTGAA668CTACGGCTTCAGAAGGATGCTTGAAACGTATATATATATATATATATATA
MA4LIMFES005D_MA4LIMFES005D_F11_.b_091 MA4LIMFES Musa acuminata cDNA clone MA4LIMFES005D_MA4LIMFES005D_F11_.b_091 5', mRNA sequence.
JK536761.1:548-567
TGCGGGGTATCAAACAGTATACTGTGTGAA548CTACGGCTTCAGAAGGATGCTTGAAACGTATTTATATATATGTCTTGCTT
MA4LIMFES002C_MA4LIMFES002C_C04_.b_033 MA4LIMFES Musa acuminata cDNA clone MA4LIMFES002C_MA4LIMFES002C_C04_.b_033 5', mRNA sequence.
JK536762.1:553-572
TGCGGGGTATCAAACAGTATACTGTGTGAA553CTACGGCTTCAGAAGGATGCTTTGAACGTATTTATATATATGTCTTGCTT
MA4LIMFES002B_MA4LIMFES002B_C11_.b_085 MA4LIMFES Musa acuminata cDNA clone MA4LIMFES002B_MA4LIMFES002B_C11_.b_085 5', mRNA sequence.
JK536763.1:539-558
TGCGGNGTATCAAACAGTATACTGTGTGAA539CTACGGCTTCAGAAGGATGCTTGAAACGTATTTATATATATGTCTTGCTT
MA4LIMFES002C_MA4LIMFES002C_B09_.b_076 MA4LIMFES Musa acuminata cDNA clone MA4LIMFES002C_MA4LIMFES002C_B09_.b_076 5', mRNA sequence.
JK536782.1:525-544
TGCGGGGTATCAAACAGTATACTGTGTGAA525CTACGGCTTCAGAAGGATGCTTGAAACGTATATATATATATATATATATA
MAC4-68I17 MA4LIMFES Musa acuminata cDNA clone MAC4-68I17 5', mRNA sequence.
JK539615.1:50-69
TGCGGGGTATCAAACAGTATACTGTGTGAA50CTACGGCTTCAGAAGGATGCTTGAAACGTATATATATATATATATATATA
Gossypium hirsutum clone NBRI_GE20897 microsatellite sequence.
JX586944.1:100-119
TGCGGGGTATCAAACAGTATACTGTGTGAA100CTACGGCTTCAGAAGGATGCTTGAAACGTATTTATATATATATATATATA
TSA: Musa acuminata AAA Group Unigene55848_NK1 mRNA sequence.
JV384780.1:141-160
ATATATATATAATATATAAATACGTTTCAA141GCATCCTTCTGAAGCCGTAGTTCACACAGTATACTGTTTGATACCCCGCA
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:1076077485-1076077504
ACGTAACGGGAGCGTTGTAGAGGCCGAAGG1076077485GCATCCTTCTGAAGCCGTAGGTTCCAGAGAGGTAGGTAAAGGTTGTCTTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTACGGCTTCAGAAGGATGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTACGGCTTCAGAAGGATGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.903 | 0.894 | search_plus_done; http://172.18.8.135:50400/match?q=CTACGGCTTCAGAAGGATGC&k=0&no_gap=0&offset=0&limit=50
0.938 | 0.035 | search_minus_done; http://172.18.8.135:50400/match?q=GCATCCTTCTGAAGCCGTAG&k=0&no_gap=0&offset=0&limit=41
0.940 | 0.002 | cgi_end;

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