GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-21 01:10:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

mte1-10J13FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR294665.1:440-464
AATATATAGTCAGTTTTCCAAATGTCAAAC440CTCAGAATCTTTGGTAGAATTTCCTTTTCTGAATTTTTGCAGGTCTCCCACCTCT
mth2-155F2FM2 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR486397.1:362-386
AATATATAGTCAGTTTTCCAAATGTCAAAC362CTCAGAATCTTTGGTAGAATTTCCTTTTCTGAATTTTTGCAGGTCTCCCACCTCT
mte1-26A15FM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR305933.1:711-735
AGAGGTGGGAGACCTGCAAAAATTCAGAAA711AGGAAATTCTACCAAAGATTCTGAGGTTTGACATTTGGAAAACTGACTATATATT
Medicago truncatula chromosome 7 BAC clone mth2-58i19, complete sequence.
AC186135.3:35512-35536
AGAGGTGGGAGACCTGCAAAAATTCAGAAA35512AGGAAATTCTACCAAAGATTCTGAGGTTTGACATTTGGAAAACTGACTATATATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCAGAATCTTTGGTAGAATTTCCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCAGAATCTTTGGTAGAATTTCCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CTCAGAATCTTTGGTAGAATTTCCT&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=AGGAAATTCTACCAAAGATTCTGAG&k=0&no_gap=0&offset=0&limit=48
0.141 | 0.001 | cgi_end;

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