GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Apodemus sylvaticus genome assembly, chromosome: 1.
OX359297.1:135785967-135785985

GGGGCTTTATGTGCCTCAGCCCTAATCCTT135785967CTCCAAACCCAACAACACAAATGTTTTGCATAAGGGGAAACTGAGGCCT

Heterocephalus glaber genome assembly, chromosome: 10.
OZ001075.1:43872116-43872134

AGCTTTTGGAGGTAGAGATTTCCTGTGACT43872116CTCCAAACCCAACAACACACCTTATTCATCAGTCTTTTTGGCAAGCAGA

Heterocephalus glaber genome assembly, chromosome: 10.
OZ001118.1:44358852-44358870

AGCTTTTGGAGGTAGAGATTTCCTGTGACT44358852CTCCAAACCCAACAACACACCTTATTCATCAGTCTTTTTGGCAAGCAGA

Micromys minutus genome assembly, chromosome: 31.
OZ004811.1:22504131-22504149

CAAAAGTGAACTCTAGATTACATCAACGAT22504131CTCCAAACCCAACAACACACACACACACACACACACACACACACACACA

Chanos chanos genome assembly, chromosome: 1.
LR697106.1:50467603-50467621

TCCCCCATCTCCCCGTATCCATTACAAAGC50467603CTCCAAACCCAACAACACACATCAATACAACCATTAATATTGTCACAAG

Raja brachyura genome assembly, chromosome: 7.
OY740787.1:88713552-88713570

CATTATTATCACTGAATCTAAATCCTGAAA88713552CTCCAAACCCAACAACACAGTGCGAGAGTGGTAGATTTCTGTAGTCATG

TSA: Cannabis sativa PK15372.1_1.CasaPuKu mRNA sequence.
JP449235.1:9-27

TGTTTCAC9CTCCAAACCCAACAACACAACTCTTCTTCTTCTTCTTCTTCCTAAAATA

Symbiodinium minutum DNA, clone: SYB2F-188D08, forward.
GA591479.1:192-210

CGTACATGACATATTTTCCCTATCGATTTC192CTCCAAACCCAACAACACATTCACATGTCGTCCCTCATTTTCTTGAATC

Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:90897649-90897667

AATTTGATCCCACCAAGCTGATTACACCCT90897649CTCCAAACCCAACAACACAACTTGACCGTGGCTGGCGCAAGACCTTCAA

Lathyrus sativus genome assembly, chromosome: 1.
OZ012735.1:737778960-737778978

ACCCATAAATTAACTTGCTAATCACAAACA737778960CTCCAAACCCAACAACACATTCAACATCAATCCACCATTAACAAAAACC

Methylobacter sp. YRD-M1 chromosome, complete genome.
CP091424.1:2907719-2907737

AGGGCAAATGTTTTTAGCGGCACGAATAAG2907719CTCCAAACCCAACAACACATAATGATGAAAATGAATCACATCAGGCTGG

Sphaerophoria taeniata genome assembly, chromosome: 3.
OX016542.1:35846448-35846466

GTCGTGTCGCGGTAGTCTGGTTGACTCGGG35846448CTCCAAACCCAACAACACAACAGAAAACCAAATGAAACAAATCCTTGCA

Piscicola geometra genome assembly, chromosome: 2.
OX030956.1:47210-47228

ACACAAAATCACGAAACAATCCCTCCATCT47210CTCCAAACCCAACAACACACCCTTACACCTATACTTTTAGCCCTCCAAA

Piscicola geometra genome assembly, chromosome: 2.
OX030956.1:52056-52074

ACACAAAATCACGAAACAATCCCTCCATCT52056CTCCAAACCCAACAACACACCCTTACACCTATACTTTTAGCCCTCCAAA

Piscicola geometra genome assembly, chromosome: 6.
OX030960.1:2529316-2529334

AAAAAAAATCACCAAACAAACCCTCCATCT2529316CTCCAAACCCAACAACACACCCCTACACCTATACTTTCAGTTCCCCAAA

Abrostola triplasia genome assembly, chromosome: 3.
OX276423.1:2917120-2917138

CACCTCCTTGTCAAATTTAACCCCCTTCCA2917120CTCCAAACCCAACAACACACACCTCTACAAGCCATAAAAAAAACACCAC

Acleris cristana genome assembly, chromosome: Z.
OX411772.1:45861367-45861385

TGGACAGTATTATTTGACGTTAAAAGTAAG45861367CTCCAAACCCAACAACACATCGAAGCTGGAAATATCAATATTTATAAAA

Lumbricus terrestris genome assembly, chromosome: 2.
OX457037.1:44674417-44674435

TGTCCTGATGTATGAGACCAGCAATTGATT44674417CTCCAAACCCAACAACACACAATGAACAAGCGACTGCCTAAGAAAACAA

Drosophila subobscura genome assembly, chromosome: E.
OY757195.1:19833691-19833709

CTAAAGATTTTCAAAGTAAACAGCACACGA19833691CTCCAAACCCAACAACACATACATACACCCAGCCCACGTATAAAATTAC

Drosophila subobscura genome assembly, chromosome: E.
OY757497.1:20137234-20137252

CTAAAGATTTTCAAAGTAAACAGCACACGA20137234CTCCAAACCCAACAACACATACATACACCCAGCCCACGTATAAAATTAC

Lordithon lunulatus genome assembly, chromosome: 2.
OZ012667.1:48202933-48202951

CGATCGAGGAACATAAGCCTTGAAAACACC48202933CTCCAAACCCAACAACACAAAGAGGGCCCAAAAAGCAAATAATCAACAA

Heterocephalus glaber genome assembly, chromosome: 16.
OX090924.1:49873828-49873846

TCTGCTTGCCAAAAAGACTGATGAATAAGG49873828TGTGTTGTTGGGTTTGGAGAGTCACAGGAAATCTCTACCTCCAAAAGCT

Heterocephalus glaber genome assembly, chromosome: 16.
OX090956.1:33573742-33573760

TCTGCTTGCCAAAAAGACTGATGAATAAGG33573742TGTGTTGTTGGGTTTGGAGAGTCACAGGAAATCTCTACCTCCAAAAGCT

Chionomys nivalis genome assembly, chromosome: 3.
OX465451.1:105823278-105823296

CCCACGCCCACATTTATACATAGGGATCTC105823278TGTGTTGTTGGGTTTGGAGGACCTGATGGGGTCCGAAAACCAGATAGCA

Myotis daubentonii genome assembly, chromosome: 11.
OY725370.1:54722700-54722718

GTCCAGCAATTGGCCTCATCTGTTAGAAAG54722700TGTGTTGTTGGGTTTGGAGCTCCCGTGTGTGGGTGCTGCCCCGGTTAAT

Salmo trutta genome assembly, chromosome: 5.
LR584433.1:61641984-61642002

TAGAAAACGTGCTACATTGATACTGATTAC61641984TGTGTTGTTGGGTTTGGAGCTGGAAAGAAAGGCATTTCACTGTACTAGT

Pelobates cultripes genome assembly, chromosome: 02.
OW240913.1:169834595-169834613

ACTGCATTCCTGGCGCCATAATCACTACAG169834595TGTGTTGTTGGGTTTGGAGTATTCCTGCGATTAACTATTTCACAAACCT

JP 2009538603-A/289: Modified Microbial Nucleic Acid.
FV536310.1:2722587-2722605

TATGTTTAGTTGGTGTTGTTTGTGGTTGAT2722587TGTGTTGTTGGGTTTGGAGGGTTGGAAGTAGTGTTTGTTGGAGAAGGTG

JP 2009538603-A/290: Modified Microbial Nucleic Acid.
FV536311.1:2722587-2722605

TATGTTTAGTTGGTGTTGTTTGTGGTTGAT2722587TGTGTTGTTGGGTTTGGAGGGTTGGAAGTAGTGTTTGTTGGAGAAGGTG

Rattus norvegicus clone CH230-120H21, WORKING DRAFT SEQUENCE, 4 unordered pieces.
AC098104.6:218023-218041

TGCTTTGTGATCATAGCAAGATCATGTGTG218023TGTGTTGTTGGGTTTGGAGGTCATTGGCACAATCCAGAGATCACTTTGG

Rattus norvegicus clone CH230-127G19, WORKING DRAFT SEQUENCE, 3 unordered pieces.
AC132033.4:107665-107683

TGCTTTGTGATCATAGCAAGATCATGTGTG107665TGTGTTGTTGGGTTTGGAGGTCATTGGCACAATCCAGAGATCACTTTGG

Vigna unguiculata cultivar Xiabao 2 chromosome Vu08.
CP039351.1:22445331-22445349

TCTTCTGTTTGAGGGTTCAATGTCAATGCT22445331TGTGTTGTTGGGTTTGGAGGGATTCATCGTTTATTGAGAATGTTAAGAA

Bipolaris zeicola strain LWII chromosome 14.
CP111180.1:1184513-1184531

TATGATGAATGCCAAACTGCTCTTATCATC1184513TGTGTTGTTGGGTTTGGAGGGACAAAGGTCGCTCTGTCAGTCTACCATA

Euphrasia confusa genome assembly, chromosome: 19.
OX940967.1:21551615-21551633

GCTAATTTTTTCTGAATTTGTTGAAATCGT21551615TGTGTTGTTGGGTTTGGAGAGAGAGAAAAAAGGTTTGAGAGAGAGAGAA

Triglochin maritima genome assembly, chromosome: 4.
OY821773.1:4131695-4131713

AGGAGTCGACGGAGTCCGGCGGAAGCCATG4131695TGTGTTGTTGGGTTTGGAGAGTTTACTTTAGGGGACGAACATCAAATGG

Autographa pulchrina genome assembly, chromosome: 13.
FR997775.1:7092791-7092809

CTTCTGCATAAATGCTGTTAGTTAGAATAT7092791TGTGTTGTTGGGTTTGGAGTACCAAATTCAATAGTATTTTTATCGGCAG

Micropterix aruncella genome assembly, chromosome: 20.
OX155969.1:14834114-14834132

ATTTTGCCTTTAGAGTCGTCCCACACAAAC14834114TGTGTTGTTGGGTTTGGAGCGTACTGTCTGACCCATTTTGGCACAAGCC

Lumbricus rubellus genome assembly, chromosome: 4.
OX243814.1:22800444-22800462

TTGTTTTCTTAGGCAGTCGCTTGTTCATTG22800444TGTGTTGTTGGGTTTGGAGAATCAATTGCTGGTCTCATACATCAGGACA

Monopis laevigella genome assembly, chromosome: 24.
OX375863.1:6537559-6537577

ACGTTTTCTTTTCATTTGTCTTGTCTCCAT6537559TGTGTTGTTGGGTTTGGAGACCGTTCGTTAGGTATAGTTTATAATTTTT

Amphimallon solstitiale genome assembly, chromosome: 2.
OY720676.1:46603700-46603718

AAAAAAAATTGCTGCCAAATATTATTATTT46603700TGTGTTGTTGGGTTTGGAGTCACTATTGATCACAATCATGGAGGTAGAA

Thysanoteuthis rhombus genome assembly, chromosome: 17.
OY735214.1:10305550-10305568

ATGTTTTTTGTGTGTGTGTGTGTGTGTGTG10305550TGTGTTGTTGGGTTTGGAGTTCTTTCACTTACCTAAACCCCCCACCCAC

Aporrectodea icterica genome assembly, chromosome: 3.
OY744604.1:51664858-51664876

TTGTTTTCTTAGGCAGTCGCTTGTTCATTG51664858TGTGTTGTTGGGTTTGGAGAATCAATTGCTGCTCTCATACATCATGACA

Lordithon lunulatus genome assembly, chromosome: 5.
OZ012670.1:15101452-15101470

TTGTTGATTATTGGCTTTTTGGGCCCTCTT15101452TGTGTTGTTGGGTTTGGAGGCTGTTTTCAAGGCTTATGTTCCTCCATCA

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Debug Info:

0.009 | 0.009 | search_start;
0.170 | 0.161 | search_plus_done; http://172.18.8.135:50400/match?q=CTCCAAACCCAACAACACA&k=0&no_gap=0&offset=0&limit=50
0.259 | 0.089 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGTTGTTGGGTTTGGAG&k=0&no_gap=0&offset=0&limit=28
0.273 | 0.015 | cgi_end;

Summary:

Results:

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