GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 04:30:58, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

SCVPCL6047G01.g CL6 Saccharum hybrid cultivar SP80-3280 cDNA clone SCVPCL6047G01 5', mRNA sequence.
CA100225.1:230-249
ACCCCGACCATGTGGTGCCCATGAACCTCG230CTCTCTGGAACAACGCCTTCGCGCGCTCCGGCCTCGCCTCAGAACAGTGG
Halomonas sp. BDJS001 chromosome, complete genome.
CP110535.1:3303844-3303863
GGCGCTCGCGCTCATCCGCTTTCAACGGCT3303844CTCTCTGGAACAACGCCTTCTGGTAGTGAGTTTTACTTTTTTTGCCCCGC
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:58227978-58227997
TCATTGGTAAAACAGGGAGATGATTGGTTG58227978CTCTCTGGAACAACGCCTTCTACTTTTATTGGCACCCAGGGATATGTCTT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:58228194-58228213
TCATTGGTAAAACAGGGAGATGATTGGTTG58228194CTCTCTGGAACAACGCCTTCTACTTTTATTGGCACCCAGGGATATATCTT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:58228303-58228322
TCATTGGTAAAACAGGGAGATGATTGGTTG58228303CTCTCTGGAACAACGCCTTCTACTTTTATTGGCACCCAGGGATATGTCTT
Gibbula magus genome assembly, chromosome: 14.
OW388302.1:58228626-58228645
TCATTGGTAAAACAGGGAGATGATTGGTTG58228626CTCTCTGGAACAACGCCTTCTACTTTTATTGGCACCCAGGGATATGTCTT
Dianthus caryophyllus mRNA, clone: CES02A20, 5' end sequence.
FY382863.1:445-464
GAAGGAGTTGCCCCCTGGAACGACGCCGCC445GAAGGCGTTGTTCCAGAGAGTGTGGAGCGATGAAGATGAAATTGTGATTT
Dianthus caryophyllus mRNA, clone: CFES05J06, 5' end sequence.
FY395908.1:446-465
GAAGGAGTTGCCCCCTGGAACGACGCCGCC446GAAGGCGTTGTTCCAGAGAGTGTGGAGCGATGAAGATGAAATTGTGATTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCTCTGGAACAACGCCTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTCTGGAACAACGCCTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.138 | 0.130 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTCTGGAACAACGCCTTC&k=0&no_gap=0&offset=0&limit=50
0.313 | 0.174 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGGCGTTGTTCCAGAGAG&k=0&no_gap=0&offset=0&limit=44
0.314 | 0.001 | cgi_end;

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