GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 16:32:15, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Taurulus bubalis genome assembly, chromosome: 3.
OU342713.1:2806729-2806748
TGTAGTATTGGTGTGCTCTTCTCAAAATCT2806729CTCTGTTCCTCTGTGTTTGGATTTTTCTCCTCAAGGCCTCGCACACCTGA
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:87417030-87417049
ACTGGTGACAAGAGAGCACGTGACAGTAAA87417030CTCTGTTCCTCTGTGTTTGGTTTTTGTTGCTGTTCACAAACCATTTCACT
Cervus elaphus genome assembly, chromosome: 11.
OU343088.1:14007740-14007759
TCTCCCTCTGGGGCCAGAGGAGAAGCTGGT14007740CCAAACACAGAGGAACAGAGTGCCCCGTGCCCACGGAGAAGTAGCTCTCC
Balaenoptera acutorostrata genome assembly, chromosome: 1.
OX465350.1:67274032-67274051
TCTTACCTCTCCCCTGCAAAACTACAAACA67274032CCAAACACAGAGGAACAGAGCGGACTGTATGCTTCCTGAGGGAAGCCAGC
Plectropomus leopardus DNA, chromosome 4, nearly complete sequence.
AP022703.1:1389082-1389101
GGCCAGACACACTAAACACACCAACACAAA1389082CCAAACACAGAGGAACAGAGGAAATAACTCCAACACTGAAAAGTAAAGCC
Valencia hispanica genome assembly, chromosome: 17.
OY747716.1:49792383-49792402
AACGTTTCAGTATTTCATACAGTGACTTGG49792383CCAAACACAGAGGAACAGAGTTCACCCAGATAATACCATAACTCTAGTCC
Mobula hypostoma genome assembly, chromosome: 1.
OY992592.1:206256678-206256697
GAAGCACCACAATCTAGGCTCCTTCCACTA206256678CCAAACACAGAGGAACAGAGTTTGGGTTGCCTCAACAACAATCACTCCTT
Nannobrachium achirus genome assembly, chromosome: 20.
OY997657.1:17856065-17856084
AACCTAACCTCAAAACCCAGCCCACCTGCA17856065CCAAACACAGAGGAACAGAGACTCTCCCCCTGCCCCCGTAACGTTACCTT
Lotus japonicus genomic DNA, chromosome 1, clone: LjB24D20, BM1404b.
AP010796.1:18593-18612
AGTGAAATGGTTTGTGAACAGCAACAAAAA18593CCAAACACAGAGGAACAGAGTTTACTGTCACGTGCTCTCTTGTCACCAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTCTGTTCCTCTGTGTTTGG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTCTGTTCCTCTGTGTTTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.101 | 0.092 | search_plus_done; http://172.18.8.135:50400/match?q=CTCTGTTCCTCTGTGTTTGG&k=0&no_gap=0&offset=0&limit=50
0.135 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=CCAAACACAGAGGAACAGAG&k=0&no_gap=0&offset=0&limit=48
0.140 | 0.005 | cgi_end;

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