GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 17:02:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Ovis canadensis canadensis isolate 43U chromosome 21 sequence.
CP011906.1:2978101-2978119
CTACTGGTTACTTTCTGTTAATGGGGACAG2978101CTGAATACATGTAAGGGCTGGACTATCCAGGCACAAAGAGCAGTTGTMA
Eudonia mercurella genome assembly, chromosome: 29.
OY720051.1:9822954-9822972
AATGTGGACATTCACTGCCAAAACTTGCAG9822954CTGAATACATGTAAGGGCTGTTTTTTCAATTCTCATATAAAAATTAAAC
Capricornis sumatraensis isolate serow.1 chromosome 8.
CP135634.1:46909562-46909580
TTGAAACTGCTGTTTGTGCCTGGATAGTCC46909562AGCCCTTACATGTATTCAGCTGTCCCCATTAATAGAAAGTAACCAGTAG
Tridacna gigas genome assembly, chromosome: 9.
OX244036.2:16032063-16032081
TTATTGCTGACAATTAATTCATGACTATAA16032063AGCCCTTACATGTATTCAGCTTTTGCAAGTGGTACAAAGGAGAAATATT
Lamellibrachia columna genome assembly, chromosome: 14.
OY759274.1:32358306-32358324
TACATCATAATGACAAGCAAAGATTGCAAT32358306AGCCCTTACATGTATTCAGGATGACCAGTAACCTGTCAGGATGACCAGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGAATACATGTAAGGGCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGAATACATGTAAGGGCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.094 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CTGAATACATGTAAGGGCT&k=0&no_gap=0&offset=0&limit=50
0.108 | 0.013 | search_minus_done; http://172.18.8.135:50400/match?q=AGCCCTTACATGTATTCAG&k=0&no_gap=0&offset=0&limit=48
0.110 | 0.002 | cgi_end;

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