GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 22:25:07, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Trifolium pratense DNA, clone:RC0829f.ab1.
DE246144.1:561-580
AATCACCGTCACTTAACAACGCAAATAACA561CTGACACTTAACAACGCAAATAATCATCGTCACTTTAACAACGCAAATAA
Lumbricus terrestris genome assembly, chromosome: 15.
OX457050.1:40719557-40719576
TTAATTTGTATGTTGGTGCCTTATTATTCG40719557CTGACACTTAACAACGCAAAGCTGTTGCTGTTCCTAATTTAACAGTTCTA
Stenurella melanura genome assembly, chromosome: 8.
OY757316.1:43643942-43643961
TATCGGATATGTGGTAAAACCAGAGTTGGC43643942TTTGCGTTGTTAAGTGTCAGCGCATAAGGATTTACATGCTTGTGTGAAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGACACTTAACAACGCAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGACACTTAACAACGCAAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.112 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CTGACACTTAACAACGCAAA&k=0&no_gap=0&offset=0&limit=50
0.127 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGCGTTGTTAAGTGTCAG&k=0&no_gap=0&offset=0&limit=48
0.128 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).