GGGenome | Results

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Mouse DNA sequence from clone RP23-18F9 on chromosome 2.
AL807384.5:216404-216422

GTTGTCTGTGCAACCCACCGCAGCCTCTGC216404CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971562.1:170332558-170332576

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170332558CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971574.1:170815577-170815595

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170815577CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971595.1:169995306-169995324

GTTGTCTGTGCAACCCACCGCAGCCTCTGC169995306CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus domesticus genome assembly, chromosome: 2.
OW971624.1:169955428-169955446

GTTGTCTGTGCAACCCACCGCAGCCTCTGC169955428CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971637.1:170133432-170133450

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170133432CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus molossinus genome assembly, chromosome: 2.
OW971659.1:170215979-170215997

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170215979CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971710.1:169585803-169585821

GTTGTCTGTGCAACCCACCGCAGCCTCTGC169585803CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971721.1:170371173-170371191

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170371173CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971742.1:170699671-170699689

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170699671CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus musculus genome assembly, chromosome: 2.
OW971763.1:170117509-170117527

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170117509CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971784.1:170212683-170212701

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170212683CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971805.1:170529168-170529186

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170529168CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus castaneus genome assembly, chromosome: 2.
OW971836.1:169240672-169240690

GTTGTCTGTGCAACCCACCACAGCCTCTGC169240672CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OW971855.1:170905316-170905334

GTTGTCTGTGCAACCCACCGCAGCCTCTGC170905316CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OX389796.1:180100341-180100359

GTTGTCTGTGCAACCCACCGCAGCCTCTGC180100341CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OX390146.1:172107501-172107519

GTTGTCTGTGCAACCCACCGCAGCCTCTGC172107501CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Mus musculus genome assembly, chromosome: 2.
OX439015.1:177363832-177363850

GTTGTCTGTGCAACCCACCGCAGCCTCTGC177363832CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Neostethus bicornis genome assembly, chromosome: 6.
LR738544.1:33340536-33340554

TACAGGTGGGTGTGGGTGCAGAAGACACTC33340536CTGCAGCCTGTACAAGTGGGTGGGGGTTGCTTTGTTTTAGTCCTTCATG

Mus musculus clone RP23-172L12, WORKING DRAFT SEQUENCE, 8 unordered pieces.
AC102807.3:158329-158347

GTTGTCTGTGCAACCCACCGCAGCCTCTGC158329CTGCAGCCTGTACAAGTGGACCACTTGTTCATCCCTTCGGCAATCACGG

Alisma plantago-aquatica genome assembly, chromosome: 4.
OY856412.1:31702280-31702298

TATTTTTTAGAGAATGATGGCAAGGGGCAG31702280CTGCAGCCTGTACAAGTGGATGAAAATTATGCAAATGAAGATATAAAAG

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26857884-26857902

ATCAGCACTGGCCTTCATTTCTCGCCATAT26857884CTGCAGCCTGTACAAGTGGTAGTGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26858408-26858426

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26858408CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26858670-26858688

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26858670CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26858932-26858950

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26858932CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26859325-26859343

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26859325CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26859587-26859605

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26859587CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26859849-26859867

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26859849CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGAACCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26860111-26860129

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26860111CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTAGG

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26860248-26860266

CAGCCTGCTCTGTAGAATGTCTCCCTATAT26860248CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTAGG

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26860385-26860403

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26860385CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26860647-26860665

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26860647CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26861564-26861582

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26861564CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26862748-26862766

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26862748CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26863010-26863028

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26863010CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26865367-26865385

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26865367CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26867330-26867348

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26867330CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26867461-26867479

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26867461CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26867723-26867741

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26867723CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26868378-26868396

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26868378CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26870341-26870359

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26870341CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26870472-26870490

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26870472CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26870734-26870752

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26870734CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26871520-26871538

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26871520CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26872827-26872845

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26872827CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26873089-26873107

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26873089CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26873351-26873369

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26873351CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26873744-26873762

CAGCCTGCCCTGTAGAATGTCTCGCCATAT26873744CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26874137-26874155

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26874137CTGCAGCCTGTACAAGTGGTAGCTGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26874268-26874286

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26874268CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26874399-26874417

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26874399CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26874661-26874679

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26874661CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26874797-26874815

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26874797CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26875064-26875082

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26875064CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26875331-26875349

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26875331CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26875598-26875616

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26875598CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26875729-26875747

CAGCCTGCCCTGTAGAATGTCTCCCCATAT26875729CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

Isoperla grammatica genome assembly, chromosome: 8.
OX246744.1:26875991-26876009

CAGCCTGCCCTGTAGAATGTCTCCCTATAT26875991CTGCAGCCTGTACAAGTGGTAGCGGGTGTAAGTAGACCCTGTCAGTACT

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Debug Info:

0.009 | 0.009 | search_start;
0.121 | 0.113 | search_plus_done; http://172.18.8.135:50400/match?q=CTGCAGCCTGTACAAGTGG&k=0&no_gap=0&offset=0&limit=50
0.189 | 0.068 | search_minus_done; http://172.18.8.135:50400/match?q=CCACTTGTACAGGCTGCAG&k=0&no_gap=0&offset=0&limit=0
0.189 | 0.000 | cgi_end;

Summary:

Results:

Data Export:

Debug Info: