GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 14:04:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Adhaeribacter radiodurans strain KUDC8001 chromosome, complete genome.
CP055153.1:6479463-6479481
ATTATGCTCAAACACGGCATGGTAGGTTTA6479463CTGGCTCCGGCTACCTTACTGTTTTACGGCTTAGCGTTATTGAATGCCA
Scyliorhinus canicula genome assembly, chromosome: 2.
LR744031.1:26171562-26171580
GTGGTCACACACCCAAGGTCGTTTTATATG26171562GTAAGGTAGCCGGAGCCAGCTGGCAGGGTGCCCAGAGCTTAGCTCCCTT
Acartia pacifica clone Apa_cDNA251 putative hypothetical protein LOC100748697 mRNA, complete cds.
KT754680.1:422-440
GTGACACTTGTTAGCGACATGCGTTGCAGT422GTAAGGTAGCCGGAGCCAGATTTATTTCTGTTTACATTACATGATATTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTGGCTCCGGCTACCTTAC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTGGCTCCGGCTACCTTAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.111 | 0.103 | search_plus_done; http://172.18.8.135:50400/match?q=CTGGCTCCGGCTACCTTAC&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=GTAAGGTAGCCGGAGCCAG&k=0&no_gap=0&offset=0&limit=49
0.143 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).