GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 06:58:30, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Caprimulgus europaeus genome assembly, chromosome: 10.
OU015533.1:25272259-25272281
CTGTATTGTAGGATTTTGTTGCAGGAATCT25272259CTTCCTTTGCATTTGGATCTCTTGTCTCTTTATATTCAATCAATTTACTTAGA
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:189719508-189719530
AAGCAAGGACTCCATCATCATCCCATTTAA189719508CTTCCTTTGCATTTGGATCTCTTCCGATCAATTTAAAAGGCGCTTCTAGGGTC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:192742786-192742808
AAGCAAGGACTCCATCATCATCCCATTTAA192742786CTTCCTTTGCATTTGGATCTCTTCCGATCAATTTAAAAGGCGCTTCTAGGGTC
S.oleracea mRNA for protein kinase.
X73298.1:2218-2240
GACCCTAGAAGCGCCTTTTAAATTGATCGG2218AAGAGATCCAAATGCAAAGGAAGTTAAATGGGATGATGATGGAGTCCTTGCTT
S.oleracea mRNA for protein kinase.
Z30332.1:2103-2125
GACCCTAGAAGCGCCTTTTAAATTGATCGG2103AAGAGATCCAAATGCAAAGGAAGTTAAATGGGATGATGATGGAGTCCTTGCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTCCTTTGCATTTGGATCTCTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCCTTTGCATTTGGATCTCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.097 | 0.088 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCCTTTGCATTTGGATCTCTT&k=0&no_gap=0&offset=0&limit=50
0.111 | 0.014 | search_minus_done; http://172.18.8.135:50400/match?q=AAGAGATCCAAATGCAAAGGAAG&k=0&no_gap=0&offset=0&limit=47
0.113 | 0.002 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).