GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:28:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Chromera velia strain CCMP2878 chloroplast, complete genome.
HM222967.2:77025-77044
TATAAAAACTTAAAGATTGTAGTCAATTTA77025CTTCTCGGCTTGCTTCGTGTGGGAAATGTGGATATGGAGACGCCACTAAA
Daucus carota subsp. sativus cultivar DH1 chromosome 4.
CP093346.1:44694342-44694361
AAGGTGGTCGGATGCCGGTAGCAGGTGGGG44694342ACACGAAGCAAGCCGAGAAGAACGAGGATATATTCCGTCGAGTTCCTCAT
Gossypium rotundifolium isolate GPK201 chromosome 13.
CP106734.1:55457507-55457526
CAAAGCCCATCTGTAGACTAGGCGAAGCCC55457507ACACGAAGCAAGCCGAGAAGCCCATATAGAGGCATCGCACCAAGGCCATA
Daucus carota isolate Kuroda chromosome 4.
CP125304.1:32983336-32983355
AAGGTGGTCGGATGCCGGTAGCAGGTGGGG32983336ACACGAAGCAAGCCGAGAAGAACGAGGATATATTCCGTCGAGTTCCTCAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTCTCGGCTTGCTTCGTGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTCTCGGCTTGCTTCGTGT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CTTCTCGGCTTGCTTCGTGT&k=0&no_gap=0&offset=0&limit=50
0.115 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=ACACGAAGCAAGCCGAGAAG&k=0&no_gap=0&offset=0&limit=49
0.117 | 0.002 | cgi_end;

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