GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 07:29:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Cliona orientalis genome assembly, chromosome: 3.
OZ005691.1:9254396-9254415
TATTATATATTCTAATTCCCTCTCTAGCAT9254396CTTGCAATTGTGCTCTTCCACTTGCAATCGGACTTTCCCTATAACGTTTG
Lutra lutra genome assembly, chromosome: 7.
LR738409.1:129034760-129034779
AGTAGACATAGAGTCCACTTAAGAAGATGT129034760TGGAAGAGCACAATTGCAAGACCTGGTGACAGGTCAGAGGTGAAAGGTAG
Meles meles genome assembly, chromosome: 6.
OV277446.1:133003358-133003377
AGTAGACATAGAGTCCACTTAAGAAGATGT133003358TGGAAGAGCACAATTGCAAGACCTGTGACAGGTCAGAGGTGAAAGGTAGA
Martes martes genome assembly, chromosome: 7.
OY734069.1:126640325-126640344
AAAAAATTAAAAAAAAAAAAAAGAAGGTGT126640325TGGAAGAGCACAATTGCAAGTCCTGGTGACAGGTCAGAGGTGAAAGGTAG
Chroicocephalus ridibundus genome assembly, chromosome: 5.
OZ001738.1:82350688-82350707
ACACACACTGCAGAAGGCAAGAAAAACCAC82350688TGGAAGAGCACAATTGCAAGACCCACATTGGCTTTTGAGACAAAACCATG
Larus fuscus genome assembly, chromosome: 5.
OZ010758.1:81671896-81671915
ACACACACTGGAGAAGGCAAGAAAAACCAC81671896TGGAAGAGCACAATTGCAAGACCCACATTGGCTTTTGAGACAAAACCATG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTGCAATTGTGCTCTTCCA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGCAATTGTGCTCTTCCA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGCAATTGTGCTCTTCCA&k=0&no_gap=0&offset=0&limit=50
0.121 | 0.026 | search_minus_done; http://172.18.8.135:50400/match?q=TGGAAGAGCACAATTGCAAG&k=0&no_gap=0&offset=0&limit=49
0.124 | 0.003 | cgi_end;

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