GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 09:24:23, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

SDSS2_44 SDSS2 Camellia sinensis var. sinensis cDNA clone P44 5', mRNA sequence.
GH710873.1:247-266
TAGGCCTAGTGGCCCTGCTCTATGCCCACG247TACGCCTGTTCCTTTCCAAGCTTCCTGACTCTTACAAGCTCCCCATGCAA
Tea005_2005-10-27_1/Tea005_G08_026_1 Camellia sinensis (tea) cultivar DT1 EST library Camellia sinensis cDNA, mRNA sequence.
JK478638.1:201-220
TAGGCCTAGTGGCCCTGCTCTATGCCCACG201TACGCCTGTTCCTTTCCAAGCTTCCTGACTCTTACAAGCTCCCCATGCAA
TSA: Camellia sinensis Singletons6764.Casi mRNA sequence.
HP768451.1:290-309
TAGGCCTACTGGCCCTGCTCTATGCCCACG290TACGCCTGTTCCTTTCCAAGCTTCCTGACTCTTACAAGCTCCCCATGCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTGGAAAGGAACAGGCGTA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGGAAAGGAACAGGCGTA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGGAAAGGAACAGGCGTA&k=0&no_gap=0&offset=0&limit=50
0.317 | 0.211 | search_minus_done; http://172.18.8.135:50400/match?q=TACGCCTGTTCCTTTCCAAG&k=0&no_gap=0&offset=0&limit=50
0.319 | 0.002 | cgi_end;

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