GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-08 18:23:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 4, clone: LjT56A04, TM1454.
AP008093.2:62542-62561
TTAATTTTTATATCCTATATTTCTTTCAAT62542CTTGTTTGGGATTTGACTTCTTTAAACACTTTAGATGGTAAAGTAAGTCA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:68736890-68736909
TTAATTTTTATATCCTATATTTCTTTCAAT68736890CTTGTTTGGGATTTGACTTCTTTAAACACTTTAGATGGTAAAGTAAGTCA
Siphonodentalium dalli isolate Sc116.8C chromosome I.
CP136061.1:70064939-70064958
GGGCTGTATTTGCTAACAATTCAATTAATT70064939CTTGTTTGGGATTTGACTTCAATATTAAGGCGAGATAACTCTATCTTCAT
Siphonodentalium dalli isolate Sc116.8C chromosome I.
CP136061.1:70159634-70159653
CGGCTGTATTTGCTAACAATTTAATTAATT70159634CTTGTTTGGGATTTGACTTCAATATTAAGGCGAGATAACTCTATCTTCAT
Anania fuscalis genome assembly, chromosome: 17.
OX493342.1:9329521-9329540
AATAAACATAAAACTTCGTCTAAAATTCAG9329521CTTGTTTGGGATTTGACTTCTCTAAATAAACTTGACAGTTAACCCTTATT
Sciurus carolinensis genome assembly, chromosome: 4.
LR738593.1:80890782-80890801
GAGAGTCAGGGGAAGTAGTGGGATCATGAA80890782GAAGTCAAATCCCAAACAAGTTCATTTGCTAGGCTCTCAAGCAGGGCTCT
Sciurus vulgaris genome assembly, chromosome: 5.
LR738615.1:82239645-82239664
GAGAGTCAGGGGAAGTAGTGGGATCATGAA82239645GAAGTCAAATCCCAAACAAGTTCATTTGCTAGGCTCTCAAGCAGGGCTCT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT23O19, TM0297b.
AP006408.1:37331-37350
TGACTTACTTTACCATCTAAAGTGTTTAAA37331GAAGTCAAATCCCAAACAAGATTGAAAGAAATATAGGATATAAAAATTAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTGTTTGGGATTTGACTTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTGTTTGGGATTTGACTTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.095 | 0.086 | search_plus_done; http://172.18.8.135:50400/match?q=CTTGTTTGGGATTTGACTTC&k=0&no_gap=0&offset=0&limit=50
0.114 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GAAGTCAAATCCCAAACAAG&k=0&no_gap=0&offset=0&limit=45
0.116 | 0.002 | cgi_end;

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