GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 14:50:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

gmrhRww3-15_A07_1_063 Soybean root hair subtracted cDNA library gmrhRww3 Glycine max cDNA, mRNA sequence.
CF920487.1:105-127
CTATAAAACATCTTATGTGGGTTCCCCAGC105CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
GLNAX44TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280789.1:449-471
CTATAAAACATCTTATGTGGGTTCCCCAGC449CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
GLNAZ73TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV280990.1:651-673
CTATAAAACATCTTATGTGGGTTCCCCAGC651CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
GLNBE72TF JCVI-SOY3 Glycine max cDNA 5', mRNA sequence.
EV282279.1:449-471
CTATAAAACATCTTATGTGGGTTCCCCAGC449CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
abe73h11.y1 Soybean methylation filtered genomic library Glycine max genomic, genomic survey sequence.
CL871202.1:362-384
CTATAAAACATCTTATGTGGGTTCCCCAGC362CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
Soybean clone JCVI-FLGm-10N5 unknown mRNA.
BT092330.1:651-673
CTATAAAACATCTTATGTGGGTTCCCCAGC651CTTTACAGGCCACCATGTGAATGGAGTCAGTTCCCTGGGTTTGTGTAATAAAG
GM830007B20H04 Gm-r1083 Glycine max cDNA clone Gm-r1083-2672 3', mRNA sequence.
BI969302.1:181-203
CTTTATTACACAAACCCAGGGAACTGACTC181CATTCACATGGTGGCCTGTAAAGGCTGGGGAACCCACATAAGATGTTTTATAG
gmrtDrNS01_25-B_M13R_H03_017.s3 Water stressed 48h segment 1 gmrtDrNS01 Glycine max cDNA 3', mRNA sequence.
CX705382.1:342-364
CTTTATTACACAAACCCAGGGAACTGACTC342CATTCACATGGTGGCCTGTAAAGGCTGGGGAACCCACATAAGATGTTTTATAG
Glycine max cultivar Williams 82 chromosome 11.
CP126436.1:9130141-9130163
CTTTATTACACAAACCCAGGGAACTGACTC9130141CATTCACATGGTGGCCTGTAAAGGCTGGGGAACCCACATAAGATGTTTTATAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTTACAGGCCACCATGTGAATG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTACAGGCCACCATGTGAATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.354 | 0.345 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTACAGGCCACCATGTGAATG&k=0&no_gap=0&offset=0&limit=50
0.430 | 0.077 | search_minus_done; http://172.18.8.135:50400/match?q=CATTCACATGGTGGCCTGTAAAG&k=0&no_gap=0&offset=0&limit=44
0.433 | 0.002 | cgi_end;

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