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Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-12 01:18:56, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Felis catus Senzu DNA, chromosome: B4, American Shorthair breed.
AP023158.1:56704090-56704108
TTGAAGAACTTCCTTCAGATATTATGATAC56704090CTTTGTTTTTCACCTGCAGCCACTATGTGAAAGGCCTAGACTTCTTGAC
Felis catus Senzu DNA, chromosome: B4, American Shorthair breed.
AP023158.1:56842334-56842352
TTGAAGAACTTCCTTCAGATATTATGATAC56842334CTTTGTTTTTCACCTGCAGCCACTATGTGAAAGGCCTAGACTTCTTGAC
Lateolabrax maculatus linkage group 23 genomic sequence, sequence.
CP032598.1:14787135-14787153
TTGAATCATGGAACCAAAAGAAAAGGACTG14787135CTTTGTTTTTCACCTGCAGGTGAAGTGTCACTGTGTTGCTTACCCCCAG
Sciaenops ocellatus chromosome 15.
CP136880.1:15083744-15083762
ACATGACTTGTTGTCAGTCACTGGAACAAA15083744CTTTGTTTTTCACCTGCAGGTTCATGGAGCACTAATGGATGCAGGATGA
Cyprinus carpio genome assembly, scaffold: LG32, chromosome: 32.
LN590696.1:8452086-8452104
TTCACAAGCATAAACCTATAGTTATGCCAT8452086CTTTGTTTTTCACCTGCAGTTATCAAGTCAAAAAAAAAAAAAACCCCAC
Cyprinus carpio genome assembly, scaffold: LG32, chromosome: 32.
LN590696.1:8452166-8452184
GTTACAAGCATAAACCTATAGTTATGCCAT8452166CTTTGTTTTTCACCTGCAGTTATCAAGTACAAAAAAAAAAAACCCCACA
Cottoperca gobio genome assembly, chromosome: 14.
LR131921.1:9200216-9200234
GCACATTTGTTTTAATGTCTCACGTTTATT9200216CTTTGTTTTTCACCTGCAGGATCAAGGAAAAATTGGCGTTATCTTCAAT
Scleropages formosus genome assembly, chromosome: 22.
LR584087.1:13977452-13977470
AGCCCCGTAGGGATGAAGGAGTGATCCTGG13977452CTTTGTTTTTCACCTGCAGGGAGCTCCTGGTATTGCTGGCGCTCCTGGC
Geotrypetes seraphini genome assembly, chromosome: 4.
LR699149.1:276055516-276055534
CATTATGCAGAGCAATGTTCAACATATAAG276055516CTTTGTTTTTCACCTGCAGTAGTCTGACATTATAACTTGATGTTTACTA
Thunnus albacares genome assembly, chromosome: 13.
OU607604.1:13101987-13102005
TCACATAGAAATGAATGTGTCACAGTCATT13101987CTTTGTTTTTCACCTGCAGGATCAAGGAAAAATTGGTGTTATCTTCAAT
Acipenser ruthenus genome assembly, chromosome: 17.
OV737698.1:11357919-11357937
TCGGAGGTGCCCATCCGCTCCGCACCCTAG11357919CTTTGTTTTTCACCTGCAGTCCTGCTCTGAGTCTCCAGAGACACGATCC
Acipenser ruthenus genome assembly, chromosome: 17.
OV737698.1:11393581-11393599
TCGGAGGTGCCCACCCGCTCCGCACCCTAG11393581CTTTGTTTTTCACCTGCAGTCCTGCTCTGAGTCTCCAGAGACACGATCC
Acipenser ruthenus genome assembly, chromosome: 17.
OV754625.1:11264553-11264571
TCGGAGGTGCCCACCCGCTCCGCACCCTAG11264553CTTTGTTTTTCACCTGCAGTCCTGCTCTGAGTCTCCAGAGACACGATCC
Pungitius pungitius genome assembly, chromosome: 3.
OX438543.1:13049036-13049054
TACCTTCGGGACAGAGAAGGAGCTGATAGC13049036CTTTGTTTTTCACCTGCAGCTCCCTCACACCGAGGGCTGTGGTGTTCTC
Thunnus thynnus genome assembly, chromosome: 13.
OZ004744.1:13021056-13021074
TCACATAGAAATGAATGTGTCACATTCATT13021056CTTTGTTTTTCACCTGCAGGATCAAGGAAAAATTGGTGTTATCTTCAAT
Labrus bergylta genome assembly, chromosome: 2.
OZ005710.1:1344214-1344232
TACTAGCTTAAATGTCGGCTTCGTTAGCAT1344214CTTTGTTTTTCACCTGCAGTCAGGAACTCTGCATTTATGAATGAATGAC
Sequence 83442 from Patent EP2761003.
JC697661.1:574-592
GGTTGATACATATGAAGACTATTTTTGATC574CTTTGTTTTTCACCTGCAG
Sequence 85404 from Patent EP2761003.
JC699623.1:575-593
GGTTTATACATATGAAGACTATTTTTGATC575CTTTGTTTTTCACCTGCAG
IC0AAA4BE09RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY279785.1:828-846
GGTTTATACATATGAAGACTATTTTTGATC828CTTTGTTTTTCACCTGCAGATGCTAAAGAGGACGAGGCAGAGGTAGCAG
IC0AAA4BE09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA4BE09, mRNA sequence.
FC898514.1:828-846
GGTTTATACATATGAAGACTATTTTTGATC828CTTTGTTTTTCACCTGCAGATGCTAAAGAGGACGAGGC
Brassica rapa subsp. pekinensis cultivar Inbred line 'Chiifu' clone KBrH014M07, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC189600.2:84694-84712
GTATAGAAAGAAAATAACTTGACTTATCAG84694CTTTGTTTTTCACCTGCAGCAGCTAGGCTATTTCCTATGAGCTTGCCAT
Brassica rapa subsp. pekinensis, pooled multiple clones, WORKING DRAFT SEQUENCE, 82 unordered pieces.
FJ789651.1:272610-272628
GTATAGAAAGAAAATAACTTGACTTATCAG272610CTTTGTTTTTCACCTGCAGCAGCTAGGCTATTTCCTATGAGCTTGCCAT
Pseudomonas syringae pv. maculicola str. ES4326 chromosome, complete genome.
CP047260.1:2656593-2656611
TGAAGCCGCTGTTCAGCAAAGCGTTCATGA2656593CTTTGTTTTTCACCTGCAGCGCGAGACTTCGGTGGTGCGCATGGGTCAT
Pseudomonas cannabina pv. alisalensis strain ES4326 chromosome.
CP084323.1:508017-508035
TGAAGCCGCTGTTCAGCAAAGCGTTCATGA508017CTTTGTTTTTCACCTGCAGCGCGAGACTTCGGTGGTGCGCATGGGTCAT
Amphipyra tragopoginis genome assembly, chromosome: 6.
HG991997.1:2102686-2102704
ATTAACAGTCACAGTCAGACATTTTTATTA2102686CTTTGTTTTTCACCTGCAGGAAAATAAAACTCCAATTCAATCAACGTTT
Atethmia centrago genome assembly, chromosome: 8.
HG995374.1:3208869-3208887
ATAAATATGCGAAGTCAGACATTTTTATTA3208869CTTTGTTTTTCACCTGCAGGGGAATAAACTTCCAATTCAATCAGCGTTT
Cosmia trapezina genome assembly, chromosome: 1.
LR991020.1:30941929-30941947
ATTAATATGCAAAGTCGGACATTTTTATTA30941929CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTT
Caradrina clavipalpis genome assembly, chromosome: 3.
OW052090.1:874019-874037
ATTAATATGCAAAGTCTGACATTTTTACGA874019CTTTGTTTTTCACCTGCAGCCAAATAAAACTTCCAATTCAATTAACGTT
Agrochola lota genome assembly, chromosome: 6.
OX376224.1:1693216-1693234
ATTAATATGCAAAGTCAGACATTTTTATTA1693216CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTT
Melanchra persicariae genome assembly, chromosome: 7.
OX376650.1:1425862-1425880
ATTAATATACGAAGTCAGACATTTTTATGA1425862CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAACGTTT
Aporophyla nigra genome assembly, chromosome: 4.
OX382295.1:3696111-3696129
ATTAATATGCAAAGTCAGACATTTTTATGA3696111CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTT
Orthosia gracilis genome assembly, chromosome: 6.
OX387270.1:25633804-25633822
ATTAATATGCAAAATCAGACATTTTTATGA25633804CTTTGTTTTTCACCTGCAGAGAAATAAAATTCCAATTTAATCAACGTTT
Orthosia incerta genome assembly, chromosome: 5.
OX411746.1:2671501-2671519
ATTAATATGCAAAGTCAGACATTTTTATGA2671501CTTTGTTTTTCACCTGCAGAGAAATAAACTTCCAATTTAATCAACGTTT
Patella depressa genome assembly, chromosome: 5.
OX419719.1:2265048-2265066
TTTTCACAATAAAGCGGTTTATTATTTTTC2265048CTTTGTTTTTCACCTGCAGCAAGTGTTGATGTTCTTATTACCTCCCTGG
Lithophane leautieri genome assembly, chromosome: 5.
OX424463.1:1354440-1354458
TAGCATTAGATTAATCAGCCATTTTTATTA1354440CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTC
Agrochola litura genome assembly, chromosome: 9.
OX424499.1:1828231-1828249
ATTAATATGCAAAGTCAGACATTTTTATTA1828231CTTTGTTTTTCACCTGCAGGAAAATAAACTTCCAATTCAATCAGCGTTA
Cerastis rubricosa genome assembly, chromosome: 6.
OX424529.1:1639686-1639704
ATTAATATGCAAAGTCAGGCATCTTTATTA1639686CTTTGTTTTTCACCTGCAGGGAAATAAACGTTCAATTCAATCAACGTTT
Hoplodrina blanda genome assembly, chromosome: 21.
OX438567.1:4708181-4708199
AATCTTGTGTCCATCAAAAACTCTCTTTTT4708181CTTTGTTTTTCACCTGCAGTGTTTAGACTAGTGTTATTTGTACAATGTG
Hoplodrina blanda genome assembly, chromosome: 4.
OX438582.1:910239-910257
ATTAATATGCAAAGTCCGACGTTTTTACGA910239CTTTGTTTTTCACCTGCAGCCAAATAAACTTCCAATTCAATCAACGTTT
Diarsia mendica genome assembly, chromosome: 5.
OX438891.1:1726455-1726473
ATTAATATGCAAAGTCAGACATTTTTATTA1726455CTTTGTTTTTCACCTGCAGGGAAATAAACTTTCAATTCAATCTACGGTT
Hoplodrina ambigua genome assembly, chromosome: 3.
OX458967.1:736001-736019
ATTAATATGCAAAGTCCGACATTTTTACGA736001CTTTGTTTTTCACCTGCAGCCAAATAAACTTCCAATTCAATCAACGTTT
Orthosia gothica genome assembly, chromosome: 8.
OX459042.1:2037031-2037049
ATTAATATGCAAAGTCAGACATTTTTATGA2037031CTTTGTTTTTCACCTGCAGAGAAATAAACTTCCAATTTAATCAACGTAT
Polymixis flavicincta genome assembly, chromosome: 4.
OX465175.1:26051796-26051814
ATTAATATGCAAAGTCAGACATTTTTATGA26051796CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTT
Eurois occulta genome assembly, chromosome: 7.
OX465484.1:1362872-1362890
GATTAATATGCAAGGCAGACATTTTTATCA1362872CTTTGTTTTTCACCTGCAGAGATTTATACTACCAATTCAATCAACGTTT
Cerastis leucographa genome assembly, chromosome: 7.
OY720385.1:1273087-1273105
ATTGATATGCAAAGTCAGGCATTTTTATTA1273087CTTTGTTTTTCACCTGCAGGGAAATAAAATTTCAATTCAATCATCGTTT
Agrochola lychnidis genome assembly, chromosome: 5.
OY796852.1:1877138-1877156
ATTAATATGCAAAATCGGACATTTTTATTA1877138CTTTGTTTTTCACCTGCAGGGAAATAAACTTCCAATTCAATCAGCGTTA
Lateolabrax maculatus chromosome Lm10.
CP027271.1:6260239-6260257
CTGGGGGTAAGCAACACAGTGACACTTCAC6260239CTGCAGGTGAAAAACAAAGCAGTCCTTTTCTTTTGGTTCCATGATTCAA
Gouania willdenowi genome assembly, chromosome: 1.
LR131998.1:23443683-23443701
AAGAGACAGAAGCATGAAGACCTTCACTTC23443683CTGCAGGTGAAAAACAAAGATGGTCAAAACTGTCTCTTTGTTGATCTCG
Neostethus bicornis genome assembly, chromosome: 11.
LR738551.1:6031453-6031471
AACTTCACTTTGCTGTAAATAATGCATGAA6031453CTGCAGGTGAAAAACAAAGTTTGGCCGAATGAGGAGGAGAAAGGTTTTT
Thunnus maccoyii genome assembly, chromosome: 13.
OU343203.1:19410309-19410327
ATTGAAGATAACACCAATTTTTCCTTGATC19410309CTGCAGGTGAAAAACAAAGAATGAATGTGACACATTCATTTCTATGTGA
Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome.
CP030759.1:1181742-1181760
ACAGGCGCAGGGTCCGAATGTCGTAGCGTT1181742CTGCAGGTGAAAAACAAAGGCGTTCCAGTTCAGCTAACTCGCGTATTTC
UCRCR01_05H05_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa05H05, mRNA sequence.
CF830857.1:443-461
CTGCTACCTCTGCCTCGTCCTCTTTAGCAT443CTGCAGGTGAAAAACAAAGGATCAAAAATAGTCTTCATATGTATAAACC
CL06-C4-500-046-F05-CT.F Rangpur lime root, greenhouse plant Citrus limonia cDNA, mRNA sequence.
EY870587.1:450-468
CTGCTACCTCTGCCTCGTCCTCTTTAGCAT450CTGCAGGTGAAAAACAAAGGATCAAAAATAGTCTTCATATGTATAAACC
CL06-C4-500-050-H11-CT.F Rangpur lime root, greenhouse plant Citrus limonia cDNA, mRNA sequence.
EY870911.1:496-514
TGCTACCTCTGCCTCGTCCTCTTTAGCATC496CTGCAGGTGAAAAACAAAGGATCAAAAATAGTCTTCTTATGTATAAACC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:257205322-257205340
CGCACGTTTATGGTGGTTCAAGTTGCTTAG257205322CTGCAGGTGAAAAACAAAGGTTGTTAACATGGCAACTCAAGCAAGCATG
Citrus sinensis genome assembly, chromosome: 7.
OY754324.1:2258458-2258476
CTACCTCTGCCTCGTCCTCCTTTTTAGCAT2258458CTGCAGGTGAAAAACAAAGGATCAAAAATAGTCTTCATATGTATCAACC
Bordetella genomosp. 8 strain AU19157 chromosome, complete genome.
CP021108.1:1723339-1723357
AAGACCCATGCCTGCACGCTGTACCAGCGG1723339CTGCAGGTGAAAAACAAAGGGGAGGCGGTATATACAGCCTTGCAACGTG
Pseudomonas cannabina pv. alisalensis strain MAFF 301419 chromosome, complete genome.
CP067022.1:2908161-2908179
ATGACCCATGCGCACCACCGAAGTCTCGCG2908161CTGCAGGTGAAAAACAAAGTCATGAACGCTTTGCTGAACAGCGGCTTCA
Nippostrongylus brasiliensis strain MIMR chromosome V.
CP130736.1:38163854-38163872
TTTCTCTAGATTTCTTGCCGCTATCTTCAC38163854CTGCAGGTGAAAAACAAAGCTATGATCCAACCTTGATTTTTATTTCTCA
Mythimna impura genome assembly, chromosome: 4.
LR990343.1:30913379-30913397
AAACGTTGATTGAATTGAGAGTTTATTTCC30913379CTGCAGGTGAAAAACAAAGTCATAAAAATGTCTGACTTTGCATATAATT
Phlogophora meticulosa genome assembly, chromosome: 3.
LR990520.1:18270504-18270522
AAACGTTGATTGAATTGAAAGTTTATTTGC18270504CTGCAGGTGAAAAACAAAGTAATAAAAATGTCCGACTTTGCATATTAAT
Mamestra brassicae genome assembly, chromosome: 5.
LR990992.1:544237-544255
AAACGTTGATTGAATTGGAAGTTTATTTCC544237CTGCAGGTGAAAAACAAAGTCATAAAAGTATCTGACTTTGCATATTAAT
Diarsia rubi genome assembly, chromosome: 7.
OW026418.1:21212711-21212729
ACCGTAGATTGAATTGAAAGTTTATTTCCC21212711CTGCAGGTGAAAAACAAAGTAATAAAAATGTCTGAATTTGCATATTAAT
Cosmia pyralina genome assembly, chromosome: 3.
OX276344.1:28664824-28664842
GCTCGCTGATTGAATTGGAAATTTATTTCC28664824CTGCAGGTGAAAAACAAAGTAATAAAAATGTCTGACTTTGCATATTAAT
Antitype chi genome assembly, chromosome: 3.
OX375810.1:1699663-1699681
AAACGCTGATTGAATTGGAAGTTTATTTCT1699663CTGCAGGTGAAAAACAAAGTCATAAAAATGTCTGACTTTGCATATTAAT
Lithophane semibrunnea genome assembly, chromosome: 5.
OX376190.1:18383813-18383831
GAACGCTGATTGAATTAGAAGTTTATTTCC18383813CTGCAGGTGAAAAACAAAGTAATAAAATCTGACTTTGCATATTAATCTA
Tiliacea aurago genome assembly, chromosome: 4.
OX402580.1:27738156-27738174
AAACGCTGATTGAATTGGAAGTTTATTTTC27738156CTGCAGGTGAAAAACAAAGTAATAAAAATGTCTGACTTTGCAAATTAAT
Lithophane ornitopus genome assembly, chromosome: 5.
OX419618.1:17613015-17613033
GAACACTGATTGAATTGGAAGTTTATTTCC17613015CTGCAGGTGAAAAACAAAGTAATAAAAATGTCTGACTTTGCATATTAAT
Polymixis lichenea genome assembly, chromosome: 4.
OX420935.1:1709603-1709621
AAACGCTAATTGAATTGGAAGTTTATTTCC1709603CTGCAGGTGAAAAACAAAGTCATAAAAATGTCTGAGTTTGCATATTAAT
Xanthia icteritia genome assembly, chromosome: 5.
OX421935.2:22294833-22294851
AAACGCTGATTGAATTGGAAGTTTATTTTC22294833CTGCAGGTGAAAAACAAAGTAATAAAAACGTCTGACTTTGCATATTAAT
Xiphydria camelus genome assembly, chromosome: 10.
OY783200.1:4238714-4238732
GCGGGGGTGACCACACCGAGTGAACTTGTG4238714CTGCAGGTGAAAAACAAAGTGAGAAAACGGACCGTCCGTCGCGCAATCG
Patella ulyssiponensis genome assembly, chromosome: 6.
OY783230.1:77453553-77453571
CCAGGGAGGTAATACGAACATCAACACTTG77453553CTGCAGGTGAAAAACAAAGGAAAAATAATAAACCGCTTTATTGTGCAAA
Xestia rhomboidea genome assembly, chromosome: 5.
OY970761.1:20287729-20287747
AAACGTTGATTGAATTGGTAGTTTATTGCC20287729CTGCAGGTGAAAAACAAAGTAATAAAAATGTCTGACTTTGCATATTAAT
Ceramica pisi genome assembly, chromosome: 7.
OY982534.1:25030688-25030706
AACCGTTGATTGAATTGGAAGTTTATTTCC25030688CTGCAGGTGAAAAACAAAGTCATAAAAATGTCAGACTTCGCATACTAAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CTTTGTTTTTCACCTGCAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CTTTGTTTTTCACCTGCAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.321 | 0.312 | search_plus_done; http://172.18.8.135:50400/match?q=CTTTGTTTTTCACCTGCAG&k=0&no_gap=0&offset=0&limit=50
0.564 | 0.243 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCAGGTGAAAAACAAAG&k=0&no_gap=0&offset=0&limit=4
0.583 | 0.019 | cgi_end;

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