GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-18 13:47:39, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Thalassophryne amazonica genome assembly, chromosome: 10.
LR722975.1:90816328-90816347
CCAGGTACAAAACACTGCTCCTTCCTTCCT90816328CCATTGTGCGTCTTTGTGTTTTCATGTGAATGTGTTTACTTTCTTCACTC
Thalassophryne amazonica genome assembly, chromosome: 10.
LR722975.1:90838955-90838974
CCAGGTACAAAACACTGCTCCTTCCTTCCT90838955CCATTGTGCGTCTTTGTGTTTTCATGTGAATGTGTTTACTTTCTTCACTC
75-L026096.SEQ Pigeonpea genomic pBluescript library Cajanus cajan genomic 5', genomic survey sequence.
CZ445542.1:553-572
TCTTCATCAGCTCGCGGAATCGACCACCGG553CCATTGTGCGTCTTTGTGTTTCTTTGAAGTTGAGAAACTGCGGTTAGTGC
Aegilops longissima genome assembly, chromosome: 7S.
LR881075.1:785493300-785493319
CTTGATACATGTGTGTGTTCCTGAGTTCCA785493300CCATTGTGCGTCTTTGTGTTTGTGTGTTCTTGAAACAAACCACAAGAGAG
Erpetoichthys calabaricus genome assembly, chromosome: 5.
LR536436.2:208247125-208247144
ATAAAACACTAAATAGACATAAATATATGA208247125AACACAAAGACGCACAATGGACTAAAAACAGAAGCGCCAGGCTACTGTTC
CccaBa025-B16TV CccABa Cajanus cajan genomic clone CccaBa025-B16, genomic survey sequence.
FI192043.1:689-708
GCACTAACCGCAGTTTCTCAACTTCAAAGA689AACACAAAGACGCACAATGGCCGGTGGTCGATTCCGCGAGCTG
Ipomoea trifida cultivar NCNSP0306 chromosome 13.
CP025656.1:7375575-7375594
GAACGCTAGATGAAGCAGGCCTGTTCCAAC7375575AACACAAAGACGCACAATGGAAGCAGTTGGAAAATCCTATTCCCGTATCT
Ipomoea triloba cultivar NCNSP0323 chromosome 4.
CP025663.1:27962037-27962056
GAACGCTGGATGAAGCAGGCCTGTCTCAAC27962037AACACAAAGACGCACAATGGAAGCAGTTGGAAAACCCTATTCCCGTACCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/Ccattgtgcgtctttgtgtt
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : Ccattgtgcgtctttgtgtt | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.123 | 0.114 | search_plus_done; http://172.18.8.135:50400/match?q=CCATTGTGCGTCTTTGTGTT&k=0&no_gap=0&offset=0&limit=50
0.185 | 0.062 | search_minus_done; http://172.18.8.135:50400/match?q=AACACAAAGACGCACAATGG&k=0&no_gap=0&offset=0&limit=46
0.188 | 0.003 | cgi_end;

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