GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 05:40:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Nibea albiflora genome assembly, chromosome: 13.
LR699036.1:348910-348929
AAGTAAATGTTTTTTTGGAGAGGCGACCAA348910GAACCAGAATCAGAACCCGAACCAGGATCAGGATGAGGATCAGAACCAGG
IC0AAA1AF12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY266487.1:45-64
CCTCTCTCTTCCCCACCAAAACCAGAACCA45GAACCAGAATCAGAACCCGAGCCCATCAATGGAGCACTCACCAAAATACC
IC0AAA1AF12RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1AF12, mRNA sequence.
FC901824.1:45-64
CCTCTCTCTTCCCCACCAAAACCAGAACCA45GAACCAGAATCAGAACCCGAGCCCATCAATGGAGCACTCACCAAAATACC
CCIG3336.b1 CCIG Mimulus guttatus DUN10 floral buds (H) Erythranthe guttata cDNA clone CCIG3336 5', mRNA sequence.
GO979296.1:281-300
GGCCCAAACAATCCAACAAAATCTGTATCT281GAACCAGAATCAGAACCCGAACCAAACGCCGATATATGGTCATTCATCAC
Digitaria exilis genome assembly, chromosome: 4B.
LR994611.1:12757923-12757942
GACAAGAGGATCGATGGGTGGTGGCAATCA12757923GAACCAGAATCAGAACCCGAACCAGAACCCGAACCAGCCGCCCACCATGG
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:29490421-29490440
AAACCAGAACCAGAACCAGAACCAGAACCA29490421GAACCAGAATCAGAACCCGAGCCCATCAATGGAGCACTCACCAAAATACC
Shewanella sp. FJAT-51649 chromosome, complete genome.
CP080411.1:1544142-1544161
CAAAGTAGTGCCGAAGTTGAACCATTGCCA1544142GAACCAGAATCAGAACCCGAACCTGTCATAGAAACTGTGGTTGAAGTCGC
Phalera bucephala genome assembly, chromosome: 21.
LR990630.1:15263733-15263752
CCTGATTTCGAACCGGCCGGCGACGAATTG15263733GAACCAGAATCAGAACCCGAAGTTAAAGAGGTAGCTTATTTTTAGTGACT
Pammene fasciana genome assembly, chromosome: 18.
OU452290.1:12819544-12819563
AAACCGGAAACGGAATCGGAACCGAAAGCG12819544GAACCAGAATCAGAACCCGAGTATTAATTAGTACTGATATTAGTGCAGCA
Pammene fasciana genome assembly, chromosome: 27.
OU452299.1:10058984-10059003
GAAGCGGAATCGGAACCTGAAGCGGAATTG10058984GAACCAGAATCAGAACCCGAGTGATAGGTGGACGACTGCAATGGGGTTGG
Dasysyrphus tricinctus genome assembly, chromosome: 1.
OY992530.1:285459003-285459022
CGAGATTAAGCTTGTTGAGCCTTAGTAGCA285459003GAACCAGAATCAGAACCCGAACCAGTATTAGAACAAGCACCAGAACCAGA
Parambassis ranga genome assembly, chromosome: 16.
LR131966.1:3032700-3032719
CCTCTTCACTTACATGGCAATAAACACGAT3032700TCGGGTTCTGATTCTGGTTCTGATTCTGAACTTGGAGAAGACGAGCGTTC
Rhinatrema bivittatum genome assembly, chromosome: 2.
LR584388.1:452284650-452284669
AGTTCTGGGATCTGGTTCCGGGGTCTGGTT452284650TCGGGTTCTGATTCTGGTTCTGGTTCTAGTTCCGGTTCTGGTTCTGGGTT
Candidatus Poribacteria bacterium isolate 89293177-375a-4259-af6b-6508537173d0 genome assembly, chromosome: 1.
OY764061.1:2856544-2856563
TGCCCTATATCAAACTCGGCAAATTCGGAT2856544TCGGGTTCTGATTCTGGTTCAAACAATTCTGTAAAACCAAGTTGCATTTG
Digitaria exilis genome assembly, chromosome: 2A.
LR994606.1:17440393-17440412
GATCCTCCATGGTGGGCGGCTGGTTCTGGT17440393TCGGGTTCTGATTCTGGTTCTGATTTTGATTGCCACCACCCGACGATCCT
Polytrichum commune genome assembly, chromosome: 5.
OX485807.1:32678470-32678489
TCTCCAACCTCAAACTCCATGAACAATGGT32678470TCGGGTTCTGATTCTGGTTCCTCCAGCTCAGCTGTGGACTGGGATTCATC
Candidatus Nitrosopelagicus brevis strain CN25, complete genome.
CP007026.1:919073-919092
CCCTCAAATGGATCCGCATCGTCTTCTGGT919073TCGGGTTCTGATTCTGGTTCTTCAACAACTGGTTCAGGTTCTGGTTCCGG
Drosophila melanogaster isolate dmeA_18_F0 chromosome X.
CP121989.1:15956989-15957008
ATGCCCCATGTATCGGGTACGGATACGGAT15956989TCGGGTTCTGATTCTGGTTCTGATTCTGATTCTGATTTTGATTCGGGTTC
Drosophila melanogaster isolate dmeA_25_F0 chromosome X.
CP122048.1:15956989-15957008
ATGCCCCATGTATCGGGTACGGATACGGAT15956989TCGGGTTCTGATTCTGGTTCTGATTCTGATTCTGATTTTGATTCGGGTTC
Drosophila melanogaster isolate dmeA_25_M0 chromosome X.
CP122054.1:15956989-15957008
ATGCCCCATGTATCGGGTACGGATACGGAT15956989TCGGGTTCTGATTCTGGTTCTGATTCTGATTCTGATTTTGATTCGGGTTC
Pterostichus niger genome assembly, chromosome: 6.
OX380339.1:5221391-5221410
TTCTTTTTCTTTGGTACTACTATTTCGGGT5221391TCGGGTTCTGATTCTGGTTCATCGTATCCTTCCGGGAAGAATAATTCGCA
Myopa testacea genome assembly, chromosome: 1.
OX451345.1:73273499-73273518
CGACTTCCTCGTCCTGCCTGCTGATCCGGT73273499TCGGGTTCTGATTCTGGTTCTGATTCGGTTTTATCCTTCAGCTCCACGAA
Dicyrtomina minuta genome assembly, chromosome: 2.
OX461810.1:63624914-63624933
CCTCGTTGTTGTCGTTGATGTTGATCTGGC63624914TCGGGTTCTGATTCTGGTTCTGGTTCTGAGAGTGGATTAATTCTGAATGT
Ochropleura leucogaster genome assembly, chromosome: 25.
OY288225.1:6597935-6597954
GTTATAAACAAGACATGATAAATAACGACA6597935TCGGGTTCTGATTCTGGTTCTAATACTGGGAATTTCTCTTGTATCGTAGG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAACCAGAATCAGAACCCGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACCAGAATCAGAACCCGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.326 | 0.317 | search_plus_done; http://172.18.8.135:50400/match?q=GAACCAGAATCAGAACCCGA&k=0&no_gap=0&offset=0&limit=50
0.373 | 0.047 | search_minus_done; http://172.18.8.135:50400/match?q=TCGGGTTCTGATTCTGGTTC&k=0&no_gap=0&offset=0&limit=39
0.381 | 0.009 | cgi_end;

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