GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:08:49, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

KS01066G07 KS01 Capsicum annuum cDNA, mRNA sequence.
BM064418.1:548-569
CAGGGAAGCCATATTAGAGTATACAACGTG548GAACGAGGGTGGAAAGTTCACAAGAATATTTTTGCAAAAAGTTTGAGATGGA
Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:254378433-254378454
CAGGGAAGCCATATTAGAGTATACAACGTG254378433GAACGAGGGTGGAAAGTTCACAAGAATATTTTTGCAAAAAGTTTGAGATGGA
Capsicum chinense COSII marker COS472 genomic sequence.
GU906177.1:512-533
CAGGGAAGCCATATTAGAGTATACAACGTG512GAACGAGGGTGGAAAGTTCACAAGAATATTTTTGCAAAAAGTTTGAGATGGA
TSA: Capsicum annuum MGMT_Contig5142, mRNA sequence.
JW055386.1:1452-1473
TCCATCTCAAACTTTTTGCAAAAATATTCT1452TGTGAACTTTCCACCCTCGTTCCACGTTGTATACTCTAATATGGCTTCCCTG
Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:1300534-1300555
TCCATCTCAAACTTTTTGCAAAAATATTCT1300534TGTGAACTTTCCACCCTCGTTCCACGTTGTATACTCTAATATGGCTTCCCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAACGAGGGTGGAAAGTTCACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAACGAGGGTGGAAAGTTCACA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.115 | 0.106 | search_plus_done; http://172.18.8.135:50400/match?q=GAACGAGGGTGGAAAGTTCACA&k=0&no_gap=0&offset=0&limit=50
0.156 | 0.041 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGAACTTTCCACCCTCGTTC&k=0&no_gap=0&offset=0&limit=47
0.157 | 0.001 | cgi_end;

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