GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 15:33:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 5, clone: LjT30D08, TM0551.
AP007427.2:57878-57897
AGAAAGGAAGTGAAAATTATGAGAGGATAA57878GAAGCACGTTTTGGTTAGATTTTTAAGGGGAAAATTGCTTTTATTTTTCC
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:76121870-76121889
AGAAAGGAAGTGAAAATTATGAGAGGATAA76121870GAAGCACGTTTTGGTTAGATTTTTAAGGGGAAAATTGCTTTTATTTTTCC
Cheilosia vernalis genome assembly, chromosome: 3.
OX421360.1:16831212-16831231
ATCTCATTAAAACAATGTGCATTTCCACAG16831212GAAGCACGTTTTGGTTAGATGTACATATATGTATATAAAACTTTAAAAAA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT07K08, TM0046b.
AP004519.1:20316-20335
GGAAAAATAAAAGCAATTTTCCCCTTAAAA20316ATCTAACCAAAACGTGCTTCTTATCCTCTCATAATTTTCACTTCCTTTCT
Lotus japonicus genomic DNA, chromosome 4, clone: LjT41M05, TM0404.
AP006697.1:43121-43140
GGAAAAATAAAAGCAATTTTCCCCTTAAAA43121ATCTAACCAAAACGTGCTTCTTATCCTCTCATAATTTTCACTTCCTTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAAGCACGTTTTGGTTAGAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAAGCACGTTTTGGTTAGAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.103 | 0.094 | search_plus_done; http://172.18.8.135:50400/match?q=GAAGCACGTTTTGGTTAGAT&k=0&no_gap=0&offset=0&limit=50
0.120 | 0.017 | search_minus_done; http://172.18.8.135:50400/match?q=ATCTAACCAAAACGTGCTTC&k=0&no_gap=0&offset=0&limit=47
0.121 | 0.002 | cgi_end;

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