GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:14:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Arachis hypogaea Ahy.Unigene19511 mRNA sequence.
JR559571.1:1018-1041
CAGCACCAGATGCATAGTTAACACCTTTAA1018GAATGTCATAGCCACTTGTGTTTGCAAAGGGTGGGATGAATTCCTCAAATCCCA
Arachis hypogaea cultivar Shitouqi chromosome B10.
CP031002.1:6204270-6204293
CAGCACCAGATGCATAGTTAACACCTTTAA6204270GAATGTCATAGCCACTTGTGTTTGCAAAGGGTGGGATGAATTCCTCAAATCCCA
Arachis hypogaea mRNA, clone: AHCG09O13, 5' end sequence.
FS963368.1:248-271
TGGGATTTGAGGAATTCATCCCACCCTTTG248CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Arachis hypogaea mRNA, clone: AHCG16I01, 5' end sequence.
FS965243.1:226-249
TGGGATTTGAGGAATTCATCCCACCCTTTG226CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Arachis hypogaea mRNA, clone: AHCL10C21, 5' end sequence.
FS969610.1:254-277
TGGGATTTGAGGAATTCATCCCACCCTTTG254CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Arachis hypogaea mRNA, clone: AHCS10E24, 5' end sequence.
FS983320.1:254-277
TGGGATTTGAGGAATTCATCCCACCCTTTG254CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Ipa.ADAB-aad79f10.b1 IPA1-root Arachis ipaensis cDNA 5', mRNA sequence.
GW972632.1:295-318
TGGGATTTGAGGAATTCATCCCACCCTTTG295CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
TSA: Arachis hypogaea CL16340Contig1.Arhy mRNA sequence.
EZ758332.1:195-218
TGGGATTTGAGGAATTCATCCCACCCTTTG195CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Arachis hypogaea cultivar Shitouqi chromosome A10.
CP030992.1:873351-873374
TGGGATTTGAGGAATTCATCCCACCCTTTG873351CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG
Arachis ipaensis cultivar K30076 chromosome 10.
CP049901.1:2842349-2842372
TGGGATTTGAGGAATTCATCCCACCCTTTG2842349CAAACACAAGTGGCTATGACATTCTTAAAGGTGTTAACTATGCATCTGGTGCTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GAATGTCATAGCCACTTGTGTTTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GAATGTCATAGCCACTTGTGTTTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.102 | search_plus_done; http://172.18.8.135:50400/match?q=GAATGTCATAGCCACTTGTGTTTG&k=0&no_gap=0&offset=0&limit=50
0.506 | 0.396 | search_minus_done; http://172.18.8.135:50400/match?q=CAAACACAAGTGGCTATGACATTC&k=0&no_gap=0&offset=0&limit=48
0.511 | 0.005 | cgi_end;

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