GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 03:14:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:10007752-10007775
CTCTCTCTCCTCCCATGTATCTCTCTCTCT10007752GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:9099672-9099695
TCTCCTCCCATCCCATGTATCTCTCTCTCT9099672GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:9255369-9255392
CTCTCTCTCCTCCCATGTATCTCTCTCTCT9255369GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:9218998-9219021
CTCTCTCTCCTCCCATGTATCTCTCTCTCT9218998GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus domestica genome assembly, chromosome: 11.
OU744552.1:9949322-9949345
CTCTCTCTCCACCCATGTATCTCTCTCTCT9949322GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus domestica genome assembly, chromosome: 11.
OU744963.1:9721061-9721084
TCTCCTCCCATCCCATGTATCTCTCTCTCT9721061GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Malus domestica genome assembly, chromosome: 11.
OU745001.1:9823577-9823600
CTCTCTCTCCTCCCATGTATCTCTCTCTCT9823577GACGCACAAATCTAAAAATGTAGTAAGCAAGTTTCCTGCCAAGGTGAAGACTGA
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:30805985-30806008
TCAGTCTGCACCTTGGCAGGAAACTTGCTT30805985ACTACATTTTTAGATTTGTGCGTCAGAGAGAGAGAGAGAGAGAGAGAGAGCATC
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:20803833-20803856
TCAGTCTTCACCTTGGCAGGAAACTTGCTT20803833ACTACATTTTTAGATTTGTGCGTCAGAGAGAGAGATACATGGGAGAGGAGAGAG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/GACGCACAAATCTAAAAATGTAGT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : GACGCACAAATCTAAAAATGTAGT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.109 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=GACGCACAAATCTAAAAATGTAGT&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.031 | search_minus_done; http://172.18.8.135:50400/match?q=ACTACATTTTTAGATTTGTGCGTC&k=0&no_gap=0&offset=0&limit=43
0.142 | 0.001 | cgi_end;

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